ID YNCE_ECOLI Reviewed; 353 AA.
AC P76116; Q2MBB1;
DT 21-FEB-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 02-NOV-2016, entry version 117.
DE RecName: Full=Uncharacterized protein YncE;
DE Flags: Precursor;
GN Name=yncE; OrderedLocusNames=b1452, JW1447;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J.,
RA Mau B., Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains
RT MG1655 and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP INDUCTION.
RX PubMed=12746439; DOI=10.1074/jbc.M303381200;
RA McHugh J.P., Rodriguez-Quinones F., Abdul-Tehrani H.,
RA Svistunenko D.A., Poole R.K., Cooper C.E., Andrews S.C.;
RT "Global iron-dependent gene regulation in Escherichia coli. A new
RT mechanism for iron homeostasis.";
RL J. Biol. Chem. 278:29478-29486(2003).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND SUBSTRATE FOR SECB.
RC STRAIN=K12 / MC4100;
RX PubMed=16352602; DOI=10.1074/jbc.M509929200;
RA Baars L., Ytterberg A.J., Drew D., Wagner S., Thilo C., van Wijk K.J.,
RA de Gier J.W.;
RT "Defining the role of the Escherichia coli chaperone SecB using
RT comparative proteomics.";
RL J. Biol. Chem. 281:10024-10034(2006).
RN [5]
RP PRELIMINARY CRYSTALLIZATION, AND SUBUNIT.
RX PubMed=18931447; DOI=10.1107/S1744309108029515;
RA Baba-Dikwa A., Thompson D., Spencer N.J., Andrews S.C., Watson K.A.;
RT "Overproduction, purification and preliminary X-ray diffraction
RT analysis of YncE, an iron-regulated Sec-dependent periplasmic protein
RT from Escherichia coli.";
RL Acta Crystallogr. F 64:966-969(2008).
CC -!- SUBUNIT: Monomer. {ECO:0000269|PubMed:18931447}.
CC -!- INDUCTION: Repressed by Fur. {ECO:0000269|PubMed:12746439}.
CC -!- MISCELLANEOUS: Preliminary crystallization indicates the presence
CC of a single beta-propeller domain that contains 7 4-stranded beta-
CC sheets.
DR EMBL; U00096; AAC74534.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE76445.1; -; Genomic_DNA.
DR PIR; G64897; G64897.
DR RefSeq; NP_415969.1; NC_000913.3.
DR RefSeq; WP_000550695.1; NZ_LN832404.1.
DR PDB; 3VGZ; X-ray; 1.70 A; A/B/C/D=1-353.
DR PDB; 3VH0; X-ray; 2.90 A; A/B/C/D=1-353.
DR PDBsum; 3VGZ; -.
DR PDBsum; 3VH0; -.
DR ProteinModelPortal; P76116; -.
DR SMR; P76116; -.
DR BioGrid; 4260198; 4.
DR DIP; DIP-28079N; -.
DR IntAct; P76116; 4.
DR STRING; 511145.b1452; -.
DR EPD; P76116; -.
DR PaxDb; P76116; -.
DR PRIDE; P76116; -.
DR EnsemblBacteria; AAC74534; AAC74534; b1452.
DR EnsemblBacteria; BAE76445; BAE76445; BAE76445.
DR GeneID; 946006; -.
DR KEGG; ecj:JW1447; -.
DR KEGG; eco:b1452; -.
DR PATRIC; 32118196; VBIEscCol129921_1518.
DR EchoBASE; EB3537; -.
DR EcoGene; EG13775; yncE.
DR eggNOG; ENOG4108NS2; Bacteria.
DR eggNOG; COG3391; LUCA.
DR HOGENOM; HOG000120631; -.
DR InParanoid; P76116; -.
DR OMA; QDDGKEH; -.
DR PhylomeDB; P76116; -.
DR BioCyc; EcoCyc:G6763-MONOMER; -.
DR BioCyc; ECOL316407:JW1447-MONOMER; -.
DR PRO; PR:P76116; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0030288; C:outer membrane-bounded periplasmic space; IGI:EcoCyc.
DR GO; GO:0003677; F:DNA binding; IDA:EcoCyc.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR011048; Haem_d1.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom.
DR SUPFAM; SSF51004; SSF51004; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Complete proteome; Reference proteome; Signal.
FT SIGNAL 1 30 {ECO:0000255}.
FT CHAIN 31 353 Uncharacterized protein YncE.
FT /FTId=PRO_0000013838.
FT STRAND 34 49 {ECO:0000244|PDB:3VGZ}.
FT TURN 50 53 {ECO:0000244|PDB:3VGZ}.
FT STRAND 54 59 {ECO:0000244|PDB:3VGZ}.
FT TURN 63 65 {ECO:0000244|PDB:3VGZ}.
FT STRAND 66 74 {ECO:0000244|PDB:3VGZ}.
FT TURN 76 78 {ECO:0000244|PDB:3VGZ}.
FT STRAND 81 89 {ECO:0000244|PDB:3VGZ}.
FT STRAND 93 97 {ECO:0000244|PDB:3VGZ}.
FT TURN 98 101 {ECO:0000244|PDB:3VGZ}.
FT STRAND 102 107 {ECO:0000244|PDB:3VGZ}.
FT TURN 108 111 {ECO:0000244|PDB:3VGZ}.
FT STRAND 112 117 {ECO:0000244|PDB:3VGZ}.
FT TURN 118 120 {ECO:0000244|PDB:3VGZ}.
FT STRAND 123 129 {ECO:0000244|PDB:3VGZ}.
FT STRAND 142 149 {ECO:0000244|PDB:3VGZ}.
FT TURN 150 153 {ECO:0000244|PDB:3VGZ}.
FT STRAND 154 163 {ECO:0000244|PDB:3VGZ}.
FT STRAND 165 170 {ECO:0000244|PDB:3VGZ}.
FT TURN 171 174 {ECO:0000244|PDB:3VGZ}.
FT STRAND 175 180 {ECO:0000244|PDB:3VGZ}.
FT STRAND 191 193 {ECO:0000244|PDB:3VGZ}.
FT TURN 194 197 {ECO:0000244|PDB:3VGZ}.
FT STRAND 198 202 {ECO:0000244|PDB:3VGZ}.
FT STRAND 206 212 {ECO:0000244|PDB:3VGZ}.
FT TURN 213 216 {ECO:0000244|PDB:3VGZ}.
FT STRAND 217 223 {ECO:0000244|PDB:3VGZ}.
FT STRAND 227 229 {ECO:0000244|PDB:3VGZ}.
FT STRAND 233 239 {ECO:0000244|PDB:3VGZ}.
FT TURN 240 243 {ECO:0000244|PDB:3VGZ}.
FT STRAND 244 259 {ECO:0000244|PDB:3VGZ}.
FT TURN 260 262 {ECO:0000244|PDB:3VGZ}.
FT STRAND 265 270 {ECO:0000244|PDB:3VGZ}.
FT STRAND 277 280 {ECO:0000244|PDB:3VGZ}.
FT TURN 281 284 {ECO:0000244|PDB:3VGZ}.
FT STRAND 285 290 {ECO:0000244|PDB:3VGZ}.
FT TURN 291 294 {ECO:0000244|PDB:3VGZ}.
FT STRAND 295 300 {ECO:0000244|PDB:3VGZ}.
FT TURN 301 304 {ECO:0000244|PDB:3VGZ}.
FT STRAND 305 311 {ECO:0000244|PDB:3VGZ}.
FT STRAND 314 321 {ECO:0000244|PDB:3VGZ}.
FT STRAND 327 333 {ECO:0000244|PDB:3VGZ}.
FT STRAND 338 340 {ECO:0000244|PDB:3VH0}.
FT STRAND 346 352 {ECO:0000244|PDB:3VGZ}.
SQ SEQUENCE 353 AA; 38613 MW; F0CA76C737035671 CRC64;
MHLRHLFSSR LRGSLLLGSL LVVSSFSTQA AEEMLRKAVG KGAYEMAYSQ QENALWLATS
QSRKLDKGGV VYRLDPVTLE VTQAIHNDLK PFGATINNTT QTLWFGNTVN SAVTAIDAKT
GEVKGRLVLD DRKRTEEVRP LQPRELVADD ATNTVYISGI GKESVIWVVD GGNIKLKTAI
QNTGKMSTGL ALDSEGKRLY TTNADGELIT IDTADNKILS RKKLLDDGKE HFFINISLDT
ARQRAFITDS KAAEVLVVDT RNGNILAKVA APESLAVLFN PARNEAYVTH RQAGKVSVID
AKSYKVVKTF DTPTHPNSLA LSADGKTLYV SVKQKSTKQQ EATQPDDVIR IAL
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