MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | RecName: Full=Flavin prenyltransferase UbiX {ECO:0000255|HAMAP-Rule:MF_01984}; EC=2.5.1.129 {ECO:0000255|HAMAP-Rule:MF_01984}; |
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MyHits synonyms | UBIX_VIBCH , Q9KP38 , 11D78C878DEB1F22 |
![]() Legends: 1, BINDING FMN. {ECO:0000255|HAMAP-Rule:MF_01984}; 2, BINDING DMAP. {ECO:0000255|HAMAP-Rule:MF_01984}; 3, NP_BIND FMN. {ECO:0000255|HAMAP-Rule:MF_01984}.
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ID UBIX_VIBCH Reviewed; 211 AA. AC Q9KP38; DT 21-FEB-2001, integrated into UniProtKB/Swiss-Prot. DT 01-OCT-2000, sequence version 1. DT 30-NOV-2016, entry version 75. DE RecName: Full=Flavin prenyltransferase UbiX {ECO:0000255|HAMAP-Rule:MF_01984}; DE EC=2.5.1.129 {ECO:0000255|HAMAP-Rule:MF_01984}; GN Name=ubiX {ECO:0000255|HAMAP-Rule:MF_01984}; GN OrderedLocusNames=VC_2541; OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961). OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; OC Vibrionaceae; Vibrio. OX NCBI_TaxID=243277; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 39315 / El Tor Inaba N16961; RX PubMed=10952301; DOI=10.1038/35020000; RA Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L., RA Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., RA Gill S.R., Nelson K.E., Read T.D., Tettelin H., Richardson D.L., RA Ermolaeva M.D., Vamathevan J.J., Bass S., Qin H., Dragoi I., RA Sellers P., McDonald L.A., Utterback T.R., Fleischmann R.D., RA Nierman W.C., White O., Salzberg S.L., Smith H.O., Colwell R.R., RA Mekalanos J.J., Venter J.C., Fraser C.M.; RT "DNA sequence of both chromosomes of the cholera pathogen Vibrio RT cholerae."; RL Nature 406:477-483(2000). CC -!- FUNCTION: Flavin prenyltransferase that catalyzes the synthesis of CC the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- CC polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase CC is metal-independent and links a dimethylallyl moiety from CC dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms CC of FMN. {ECO:0000255|HAMAP-Rule:MF_01984}. CC -!- CATALYTIC ACTIVITY: Dimethylallyl phosphate + FMNH(2) = prenylated CC FMNH(2) + phosphate. {ECO:0000255|HAMAP-Rule:MF_01984}. CC -!- SIMILARITY: Belongs to the UbiX/PAD1 family. {ECO:0000255|HAMAP- CC Rule:MF_01984}. DR EMBL; AE003852; AAF95682.1; -; Genomic_DNA. DR PIR; G82063; G82063. DR RefSeq; NP_232169.1; NC_002505.1. DR RefSeq; WP_001883898.1; NC_002505.1. DR ProteinModelPortal; Q9KP38; -. DR STRING; 243277.VC2541; -. DR DNASU; 2615558; -. DR EnsemblBacteria; AAF95682; AAF95682; VC_2541. DR GeneID; 2615558; -. DR KEGG; vch:VC2541; -. DR PATRIC; 20084105; VBIVibCho83274_2419. DR eggNOG; ENOG4108UMA; Bacteria. DR eggNOG; COG0163; LUCA. DR KO; K03186; -. DR OMA; QGLVPRW; -. DR BioCyc; VCHO:VC2541-MONOMER; -. DR Proteomes; UP000000584; Chromosome 1. DR GO; GO:0008694; F:3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity; ISS:TIGR. DR GO; GO:0016831; F:carboxy-lyase activity; IBA:GO_Central. DR GO; GO:0004659; F:prenyltransferase activity; IEA:UniProtKB-HAMAP. DR GO; GO:0009108; P:coenzyme biosynthetic process; IBA:GO_Central. DR GO; GO:0006744; P:ubiquinone biosynthetic process; ISS:TIGR. DR Gene3D; 3.40.50.1950; -; 1. DR HAMAP; MF_01984; ubiX_pad; 1. DR InterPro; IPR003382; Flavoprotein. DR InterPro; IPR004507; UbiX_Pad1. DR Pfam; PF02441; Flavoprotein; 1. DR SUPFAM; SSF52507; SSF52507; 1. DR TIGRFAMs; TIGR00421; ubiX_pad; 1. PE 3: Inferred from homology; KW Complete proteome; Flavoprotein; FMN; Prenyltransferase; KW Reference proteome; Transferase. FT CHAIN 1 211 Flavin prenyltransferase UbiX. FT /FTId=PRO_0000134975. FT NP_BIND 15 17 FMN. {ECO:0000255|HAMAP-Rule:MF_01984}. FT NP_BIND 106 109 FMN. {ECO:0000255|HAMAP-Rule:MF_01984}. FT BINDING 41 41 FMN. {ECO:0000255|HAMAP-Rule:MF_01984}. FT BINDING 141 141 FMN. {ECO:0000255|HAMAP-Rule:MF_01984}. FT BINDING 171 171 DMAP. {ECO:0000255|HAMAP-Rule:MF_01984}. FT BINDING 187 187 DMAP. {ECO:0000255|HAMAP-Rule:MF_01984}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 7 204 ihamap:ubiX_pad [T] FT MYHIT 8 183 ipfam:Flavoprotein [T] SQ SEQUENCE 211 AA; 22731 MW; 11D78C878DEB1F22 CRC64; MSMNNNRTIT LAWTGASGAP YGLRLLQCLL AADYQVYLLI SSAARVVLAT EHGLKLPANP EAAQAALVEH LGCASDKLVV CGKEDWFSPV ASGSAAPKQM VVCPCSAGSV AAIAHGMSDN LIERAADVVL KERGQLLLVV RETPFSTLHL ENMLKLSHMG VTIMPAAPGF YHQPQSIDDL VDFMVARILD HLGIEQALVP RWGYDQRVRG E // |