MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | RecName: Full=50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; |
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| MyHits synonyms | RL18_STAS1 , Q49ZF2 , FCA24718848451F4 |
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ID RL18_STAS1 Reviewed; 120 AA.
AC Q49ZF2;
DT 22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
DT 13-SEP-2005, sequence version 1.
DT 02-NOV-2016, entry version 69.
DE RecName: Full=50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337};
GN Name=rplR {ECO:0000255|HAMAP-Rule:MF_01337};
GN OrderedLocusNames=SSP0679;
OS Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 /
OS DSM 20229).
OC Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae;
OC Staphylococcus.
OX NCBI_TaxID=342451;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 15305 / DSM 20229;
RX PubMed=16135568; DOI=10.1073/pnas.0502950102;
RA Kuroda M., Yamashita A., Hirakawa H., Kumano M., Morikawa K.,
RA Higashide M., Maruyama A., Inose Y., Matoba K., Toh H., Kuhara S.,
RA Hattori M., Ohta T.;
RT "Whole genome sequence of Staphylococcus saprophyticus reveals the
RT pathogenesis of uncomplicated urinary tract infection.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:13272-13277(2005).
CC -!- FUNCTION: This is one of the proteins that binds and probably
CC mediates the attachment of the 5S RNA into the large ribosomal
CC subunit, where it forms part of the central protuberance.
CC {ECO:0000255|HAMAP-Rule:MF_01337}.
CC -!- SUBUNIT: Part of the 50S ribosomal subunit; part of the 5S
CC rRNA/L5/L18/L25 subcomplex. Contacts the 5S and 23S rRNAs.
CC {ECO:0000255|HAMAP-Rule:MF_01337}.
CC -!- SIMILARITY: Belongs to the ribosomal protein L18P family.
CC {ECO:0000255|HAMAP-Rule:MF_01337}.
DR EMBL; AP008934; BAE17824.1; -; Genomic_DNA.
DR RefSeq; WP_011302601.1; NC_007350.1.
DR ProteinModelPortal; Q49ZF2; -.
DR STRING; 342451.SSP0679; -.
DR EnsemblBacteria; BAE17824; BAE17824; SSP0679.
DR GeneID; 3615978; -.
DR KEGG; ssp:SSP0679; -.
DR PATRIC; 19622842; VBIStaSap90642_0681.
DR eggNOG; ENOG4105K4C; Bacteria.
DR eggNOG; COG0256; LUCA.
DR HOGENOM; HOG000248742; -.
DR KO; K02881; -.
DR OMA; KRHKRVR; -.
DR OrthoDB; POG091H01SD; -.
DR Proteomes; UP000006371; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-HAMAP.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-HAMAP.
DR HAMAP; MF_01337_B; Ribosomal_L18_B; 1.
DR InterPro; IPR005484; Ribosomal_L18.
DR InterPro; IPR004389; Ribosomal_L18_bac-type.
DR Pfam; PF00861; Ribosomal_L18p; 1.
DR TIGRFAMs; TIGR00060; L18_bact; 1.
PE 3: Inferred from homology;
KW Complete proteome; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1 120 50S ribosomal protein L18.
FT /FTId=PRO_0000131351.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 6 120 ihamap:Ribosomal_L18_B [T]
FT MYHIT 6 120 ipfam:Ribosomal_L18p [T]
SQ SEQUENCE 120 AA; 13281 MW; FCA24718848451F4 CRC64;
MISKIDKNKV RLKRHARVRN KLAGTAEKPR LNIYRSNKHI YAQVIDDVSG KTLAQASTQE
KDLANESGSK VELSAKVGET VAKRASEKGV KTIVFDRGGY LYHGRVKALA DAARENGLEF
//
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