MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | RecName: Full=Photosystem II reaction center protein M {ECO:0000255|HAMAP-Rule:MF_00438}; Short=PSII-M {ECO:0000255|HAMAP-Rule:MF_00438}; |
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MyHits synonyms | PSBM_ORYSI , P0C412 , P12169 , P62110 , Q6QXV8 , 70D38C04E4AB4222 |
![]() Legends: 1, CHAIN Photosystem II reaction center protein M; 2, TRANSMEM Helical. {ECO:0000255|HAMAP- Rule:MF_00438}; 3, ihamap:PSII_PsbM [T].
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ID PSBM_ORYSI Reviewed; 34 AA. AC P0C412; P12169; P62110; Q6QXV8; DT 29-MAY-2007, integrated into UniProtKB/Swiss-Prot. DT 29-MAY-2007, sequence version 1. DT 02-NOV-2016, entry version 33. DE RecName: Full=Photosystem II reaction center protein M {ECO:0000255|HAMAP-Rule:MF_00438}; DE Short=PSII-M {ECO:0000255|HAMAP-Rule:MF_00438}; GN Name=psbM {ECO:0000255|HAMAP-Rule:MF_00438}; OS Oryza sativa subsp. indica (Rice). OG Plastid; Chloroplast. OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; OC Oryzoideae; Oryzeae; Oryzinae; Oryza. OX NCBI_TaxID=39946; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. 93-11; RX PubMed=15122023; DOI=10.1104/pp.103.031245; RA Tang J., Xia H., Cao M., Zhang X., Zeng W., Hu S., Tong W., Wang J., RA Wang J., Yu J., Yang H., Zhu L.; RT "A comparison of rice chloroplast genomes."; RL Plant Physiol. 135:412-420(2004). CC -!- FUNCTION: One of the components of the core complex of photosystem CC II (PSII). PSII is a light-driven water:plastoquinone CC oxidoreductase that uses light energy to abstract electrons from CC H(2)O, generating O(2) and a proton gradient subsequently used for CC ATP formation. It consists of a core antenna complex that captures CC photons, and an electron transfer chain that converts photonic CC excitation into a charge separation. This subunit is found at the CC monomer-monomer interface. {ECO:0000255|HAMAP-Rule:MF_00438}. CC -!- SUBUNIT: PSII is composed of 1 copy each of membrane proteins CC PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL, CC PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral CC proteins of the oxygen-evolving complex and a large number of CC cofactors. It forms dimeric complexes. {ECO:0000255|HAMAP- CC Rule:MF_00438}. CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane CC {ECO:0000255|HAMAP-Rule:MF_00438}; Single-pass membrane protein CC {ECO:0000255|HAMAP-Rule:MF_00438}. CC -!- SIMILARITY: Belongs to the PsbM family. {ECO:0000255|HAMAP- CC Rule:MF_00438}. DR EMBL; AY522329; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR RefSeq; YP_009161352.1; NC_027678.1. DR ProteinModelPortal; P0C412; -. DR SMR; P0C412; -. DR GeneID; 25193338; -. DR Proteomes; UP000007015; Chloroplast. DR GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell. DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW. DR GO; GO:0009523; C:photosystem II; IEA:UniProtKB-KW. DR GO; GO:0009536; C:plastid; IC:Gramene. DR GO; GO:0019684; P:photosynthesis, light reaction; IEA:InterPro. DR HAMAP; MF_00438; PSII_PsbM; 1. DR InterPro; IPR007826; PSII_PsbM. DR Pfam; PF05151; PsbM; 1. DR TIGRFAMs; TIGR03038; PS_II_psbM; 1. PE 3: Inferred from homology; KW Chloroplast; Complete proteome; Membrane; Photosynthesis; KW Photosystem II; Plastid; Reaction center; Reference proteome; KW Thylakoid; Transmembrane; Transmembrane helix. FT CHAIN 1 34 Photosystem II reaction center protein M. FT /FTId=PRO_0000289570. FT TRANSMEM 5 25 Helical. {ECO:0000255|HAMAP- FT Rule:MF_00438}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 1 34 ihamap:PSII_PsbM [T] FT MYHIT 1 31 ipfam:PsbM [T] SQ SEQUENCE 34 AA; 3783 MW; 70D38C04E4AB4222 CRC64; MEVNILAFIA TALFILVPTA FLLIIYVKTV SQND // |