MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | RecName: Full=Phosphoprotein; Short=Protein P; |
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MyHits synonyms | PHOSP_PHODV , P35939 , D24BC3F3B86F712E |
![]() Legends: 1, CONFLICT A -> T (in Ref. 2; CAA53573). {ECO:0000305}; 2, CONFLICT A -> V (in Ref. 2; CAA53573). {ECO:0000305}; 3, CONFLICT DV -> EL (in Ref. 2; CAA53573). {ECO:0000305}.
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ID PHOSP_PHODV Reviewed; 507 AA. AC P35939; DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot. DT 01-JUN-1994, sequence version 1. DT 02-NOV-2016, entry version 62. DE RecName: Full=Phosphoprotein; DE Short=Protein P; GN Name=P/V; OS Phocine distemper virus (PDV). OC Viruses; ssRNA viruses; ssRNA negative-strand viruses; OC Mononegavirales; Paramyxoviridae; Morbillivirus. OX NCBI_TaxID=11240; OH NCBI_TaxID=9709; Phocidae (true seals). RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC RNA]. RC STRAIN=Ulster/88; RX PubMed=1535099; DOI=10.1099/0022-1317-73-6-1587; RA Curran M.D., Rima B.K.; RT "The genes encoding the phospho- and matrix proteins of phocine RT distemper virus."; RL J. Gen. Virol. 73:1587-1591(1992). RN [2] RP NUCLEOTIDE SEQUENCE [GENOMIC RNA], AND RNA EDITING. RC STRAIN=Isolate DK88-4A; RX PubMed=1634877; DOI=10.1099/0022-1317-73-4-885; RA Blixenkrone-Moeller M., Sharma B., Varsanyi T., Hu A., Norrby E., RA Koevamees J.; RT "Sequence analysis of the genes encoding the nucleocapsid protein and RT phosphoprotein (P) of phocid distemper virus, and editing of the P RT gene transcript."; RL J. Gen. Virol. 73:885-893(1992). CC -!- FUNCTION: Essential component of the RNA polymerase and the CC nascent chain assembly complex. Also required during RNA CC synthesis. CC -!- RNA EDITING: Modified_positions=231 {ECO:0000269|PubMed:1634877}; CC Note=Partially edited. RNA editing at this position consists of an CC insertion of one guanine nucleotide. The sequence displayed here CC is the P protein, derived from the unedited RNA. The edited RNA CC version gives rise to the V protein (AC P35941).; CC -!- SIMILARITY: Belongs to the morbillivirus P protein family. CC {ECO:0000305}. DR EMBL; D10371; BAA01203.1; -; Genomic_RNA. DR EMBL; X75960; CAA53573.1; -; Genomic_RNA. DR PIR; JQ1609; JQ1563. DR ProteinModelPortal; P35939; -. DR GO; GO:0003723; F:RNA binding; IEA:InterPro. DR GO; GO:0003968; F:RNA-directed RNA polymerase activity; IEA:InterPro. DR GO; GO:0006351; P:transcription, DNA-templated; IEA:InterPro. DR GO; GO:0019079; P:viral genome replication; IEA:InterPro. DR InterPro; IPR004897; P/V_Pprotein_paramyxoviral. DR InterPro; IPR028243; Paramyxo_P/V_N. DR InterPro; IPR016075; RNA_pol_Pprot-P_XD_paramyxovir. DR Pfam; PF03210; Paramyx_P_V_C; 1. DR Pfam; PF13825; Paramyxo_PNT; 1. DR SUPFAM; SSF101089; SSF101089; 1. PE 3: Inferred from homology; KW Phosphoprotein; RNA editing; Viral RNA replication. FT CHAIN 1 507 Phosphoprotein. FT /FTId=PRO_0000142698. FT CONFLICT 192 192 A -> T (in Ref. 2; CAA53573). FT {ECO:0000305}. FT CONFLICT 224 224 A -> V (in Ref. 2; CAA53573). FT {ECO:0000305}. FT CONFLICT 393 394 DV -> EL (in Ref. 2; CAA53573). FT {ECO:0000305}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 324 501 ipfam:Paramyx_P_V_C [T] FT MYHIT 4 312 ipfam:Paramyxo_PNT [T] SQ SEQUENCE 507 AA; 54691 MW; D24BC3F3B86F712E CRC64; MAEEQAYHVS KGLECIKALR ENPPNMEEIQ EVSNIRDQTY KSSKESGTTG VQEEEITQNI DESHTPTKRS NSVSDVLQED QRGREDNTAP VEAKDRIEED TQTGPAVRRY YVYDHCGEKV KGIEDADSLM VPAGPPSNRG FEGREGSLDD SIEDSSEDYS EGNASSNWGY TFGLNPDRAA DVSMLMEEEL TALLGTGHNA GGQKRDGRTL QFPNSPEGSI GNQACEPIKK GTGEKLASHG MMTAAGLTNG ATRSAPKSTG GSSGPNASAG SVPQSVTTAK MIQKCKTESG TRPQPEKPNE IESDGEYDDE LFSEIQEIRS AITKLTEDNQ SILSKLDTLL LLKGEIDSIK KQISKQNIAI STIEGHLSSI MIAIPGFGKD TGDPTANVDI NPDVRPIIGR DSGRALAEVL KKPASSRGNQ KDGGLILGSK GQLLKDLQLK PIDKNSSSAI GFKPKDSAPS KAVIASLIRS SKVDQSHKQN MLSLLKNIKG DDNLNEFYQM IKSISHI // |