MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | RecName: Full=Formate dehydrogenase major subunit; EC=1.2.1.2; AltName: Full=Formate dehydrogenase subunit alpha; Short=FDH subunit alpha; Flags: Precursor; |
MyHits synonyms | FDXG_HAEIN , P46448 , 4A2E55B78B301300 |
Legends: 1, Iron-sulfur (4Fe-4S). {ECO:0000255|PROSITE-ProRule:PRU01004}; 2, NON_STD Selenocysteine. {ECO:0000305}; 3, SIGNAL Tat-type signal. {ECO:0000255|PROSITE- ProRule:PRU00648}; 4, 4Fe-4S Mo/W bis-MGD-type. {ECO:0000255|PROSITE-ProRule:PRU01004}; 5, iprf:4FE4S_MOW_BIS_MGD [T]; 6, iprf:TAT [T]; 7, ipat:MOLYBDOPTERIN_PROK_1 [T]; 8, ipfam:Molybdop_Fe4S4 [T]; 9, ipfam:Molydop_binding [T]; 10, ipat:MOLYBDOPTERIN_PROK_3 [T]; 11, ismart:Molybdop_Fe4S4 [T].
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ID FDXG_HAEIN Reviewed; 1028 AA. AC P46448; DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot. DT 26-FEB-2008, sequence version 2. DT 07-SEP-2016, entry version 113. DE RecName: Full=Formate dehydrogenase major subunit; DE EC=1.2.1.2; DE AltName: Full=Formate dehydrogenase subunit alpha; DE Short=FDH subunit alpha; DE Flags: Precursor; GN Name=fdxG; OrderedLocusNames=HI_0006; OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd). OC Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; OC Pasteurellaceae; Haemophilus. OX NCBI_TaxID=71421; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=ATCC 51907 / DSM 11121 / KW20 / Rd; RX PubMed=7542800; DOI=10.1126/science.7542800; RA Fleischmann R.D., Adams M.D., White O., Clayton R.A., Kirkness E.F., RA Kerlavage A.R., Bult C.J., Tomb J.-F., Dougherty B.A., Merrick J.M., RA McKenney K., Sutton G.G., FitzHugh W., Fields C.A., Gocayne J.D., RA Scott J.D., Shirley R., Liu L.-I., Glodek A., Kelley J.M., RA Weidman J.F., Phillips C.A., Spriggs T., Hedblom E., Cotton M.D., RA Utterback T.R., Hanna M.C., Nguyen D.T., Saudek D.M., Brandon R.C., RA Fine L.D., Fritchman J.L., Fuhrmann J.L., Geoghagen N.S.M., RA Gnehm C.L., McDonald L.A., Small K.V., Fraser C.M., Smith H.O., RA Venter J.C.; RT "Whole-genome random sequencing and assembly of Haemophilus influenzae RT Rd."; RL Science 269:496-512(1995). CC -!- FUNCTION: Allows to use formate as major electron donor during CC anaerobic respiration. Subunit alpha possibly forms the active CC site. CC -!- CATALYTIC ACTIVITY: Formate + NAD(+) = CO(2) + NADH. CC -!- COFACTOR: CC Name=Mo-bis(molybdopterin guanine dinucleotide); CC Xref=ChEBI:CHEBI:60539; Evidence={ECO:0000250}; CC Note=Binds 1 molybdenum-bis(molybdopterin guanine dinucleotide) CC (Mo-bis-MGD) cofactor per subunit. {ECO:0000250}; CC -!- COFACTOR: CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883; CC Evidence={ECO:0000305}; CC Note=Binds 1 [4Fe-4S] cluster. {ECO:0000305}; CC -!- SUBUNIT: Formate dehydrogenase is a membrane-bound complex, formed CC by subunits alpha, beta and gamma. CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000305}. CC -!- PTM: Predicted to be exported by the Tat system. The position of CC the signal peptide cleavage has not been experimentally proven. CC -!- SIMILARITY: Belongs to the prokaryotic molybdopterin-containing CC oxidoreductase family. {ECO:0000305}. CC -!- SIMILARITY: Contains 1 4Fe-4S Mo/W bis-MGD-type domain. CC {ECO:0000255|PROSITE-ProRule:PRU01004}. DR EMBL; L42023; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR OMA; PLHWGFE; -. DR Proteomes; UP000000579; Chromosome. DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell. DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW. DR GO; GO:0009055; F:electron carrier activity; IEA:InterPro. DR GO; GO:0047111; F:formate dehydrogenase (cytochrome-c-553) activity; IEA:InterPro. DR GO; GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:UniProtKB-EC. DR GO; GO:0030151; F:molybdenum ion binding; IEA:InterPro. DR GO; GO:0043546; F:molybdopterin cofactor binding; IEA:InterPro. DR GO; GO:0045333; P:cellular respiration; IEA:InterPro. DR InterPro; IPR009010; Asp_de-COase-like_dom. DR InterPro; IPR006443; Formate-DH-alph_fdnG. DR InterPro; IPR006657; MoPterin_dinucl-bd_dom. DR InterPro; IPR006656; Mopterin_OxRdtase. DR InterPro; IPR006963; Mopterin_OxRdtase_4Fe-4S_dom. DR InterPro; IPR006655; Mopterin_OxRdtase_prok_CS. DR InterPro; IPR027467; MopterinOxRdtase_cofactor_BS. DR InterPro; IPR006311; TAT_signal. DR Pfam; PF04879; Molybdop_Fe4S4; 1. DR Pfam; PF00384; Molybdopterin; 1. DR Pfam; PF01568; Molydop_binding; 1. DR SMART; SM00926; Molybdop_Fe4S4; 1. DR SUPFAM; SSF50692; SSF50692; 2. DR TIGRFAMs; TIGR01553; formate-DH-alph; 1. DR PROSITE; PS51669; 4FE4S_MOW_BIS_MGD; 1. DR PROSITE; PS00551; MOLYBDOPTERIN_PROK_1; 1. DR PROSITE; PS00932; MOLYBDOPTERIN_PROK_3; 1. DR PROSITE; PS51318; TAT; 1. PE 3: Inferred from homology; KW 4Fe-4S; Complete proteome; Iron; Iron-sulfur; Metal-binding; KW Molybdenum; NAD; Oxidoreductase; Periplasm; Reference proteome; KW Selenocysteine; Signal. FT SIGNAL 1 33 Tat-type signal. {ECO:0000255|PROSITE- FT ProRule:PRU00648}. FT CHAIN 34 1028 Formate dehydrogenase major subunit. FT /FTId=PRO_0000063224. FT DOMAIN 43 114 4Fe-4S Mo/W bis-MGD-type. FT {ECO:0000255|PROSITE-ProRule:PRU01004}. FT METAL 50 50 Iron-sulfur (4Fe-4S). FT {ECO:0000255|PROSITE-ProRule:PRU01004}. FT METAL 53 53 Iron-sulfur (4Fe-4S). FT {ECO:0000255|PROSITE-ProRule:PRU01004}. FT METAL 57 57 Iron-sulfur (4Fe-4S). FT {ECO:0000255|PROSITE-ProRule:PRU01004}. FT METAL 100 100 Iron-sulfur (4Fe-4S). FT {ECO:0000255|PROSITE-ProRule:PRU01004}. FT NON_STD 204 204 Selenocysteine. {ECO:0000305}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 43 114 iprf:4FE4S_MOW_BIS_MGD [T] FT MYHIT 117 591 ipfam:Molybdopterin [T] FT MYHIT 1 33 iprf:TAT [T] FT MYHIT 48 66 ipat:MOLYBDOPTERIN_PROK_1 [T] FT MYHIT 47 112 ipfam:Molybdop_Fe4S4 [T] FT MYHIT 898 1018 ipfam:Molydop_binding [T] FT MYHIT 934 961 ipat:MOLYBDOPTERIN_PROK_3 [T] FT MYHIT 43 112 ismart:Molybdop_Fe4S4 [T] SQ SEQUENCE 1028 AA; 115451 MW; 4A2E55B78B301300 CRC64; MQVSRRKFFK ICAGGMAGTS AAMLGFAPAN VLAAPREYKL LRAFESRNTC TYCAVSCGML LYSTGKPYNS LSSHTGTNTR SKLFHIEGDP DHPVSRGALC PKGAGSLDYV NSESRSLYPQ YRAPGSDKWE RISWKDAIKR IARLMKDDRD ANFVEKDSNG KTVNRWATTG IMTASAMSNE AALLTQKWIR MLGMVPVCNQ ANTUHGPTVA SLAPSFGRGA MTNNWVDIKN ANLIIVQGGN PAEAHPVGFR WAIEAKKNGA KIIVIDPRFN RTASVADLHA PIRSGSDITF LMGVIRYLLE TNQIQHEYVK HYTNASFLID EGFKFEDGLF VGYNEEKRNY DKSKWNYQFD ENGHAKRDMT LQHPRCVINI LKEHVSRYTP EMVERITGVK QKLFLQICEE IGKTSVPNKT MTHLYALGFT EHSIGTQNIR SMAIIQLLLG NMGMPGGGIN ALRGHSNVQG TTDMGLLPMS LPGYMRLPND KDTSYDQYIN AITPKDIVPN QVNYYRHTSK FFVSMMKTFY GDNATKENGW GFDFLPKADR LYDPITHVKL MNEGKLHGWI LQGFNVLNSL PNKNKTLSGM SKLKYLVVMD PLQTESSEFW RNFGESNNVN PAEIQTEVFR LPTTCFAEEE GSIVNSGRWT QWHWKGCDQP GEALPDVDIL SMLREEMHEL YKKEGGQGIE SFEAMTWNYA QPHSPSAVEL AKELNGYALE DLYDPNGNLM YKKGQLLNGF AHLRDDGTTT SGNWLYVGQW TEKGNQTANR DNSDPSGLGC TIGWGFAWPA NRRVLYSRAS LDINGNPWDK NRQLIKWNGK NWNWFDIADY GTQPPGSDTG PFIMSAEGVG RLFAVDKIAN GPMPEHYEPV ESPIDTNPFH PNVVTDPTLR IYKEDREFIG SNKEYPFVAT TYRLTEHFHS WTAQSALNII AQPQQFVEIG EKLAAEKGIQ KGDMVKITSR RGYIKAVAVV TKRLKDLEID GRVVHHIGLP IHWNMKALNG KGNRGFSTNT LTPSWGEAIT QTPEYKTFLV NIEKVGEA // |