MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
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Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | RecName: Full=Putative defensin-like protein 251; AltName: Full=Putative S locus cysteine-rich-like protein 12; Short=Protein SCRL12; Short=SCR-like protein 12; Flags: Precursor; |
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| MyHits synonyms | DF251_ARATH , P82631 , 67C070B5A85B746F |
 Legends: 1, SIGNAL {ECO:0000255}; 2, CHAIN Putative defensin-like protein 251.
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ID DF251_ARATH Reviewed; 92 AA.
AC P82631;
DT 13-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 30-NOV-2016, entry version 60.
DE RecName: Full=Putative defensin-like protein 251;
DE AltName: Full=Putative S locus cysteine-rich-like protein 12;
DE Short=Protein SCRL12;
DE Short=SCR-like protein 12;
DE Flags: Precursor;
GN Name=SCRL12; OrderedLocusNames=At3g23727; ORFNames=MYM9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000305};
RN [1] {ECO:0000305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II.
RT Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC
RT and BAC clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RG The Arabidopsis Information Resource (TAIR);
RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000305}
RP IDENTIFICATION.
RX PubMed=11437247; DOI=10.1023/A:1010664704926;
RA Vanoosthuyse V., Miege C., Dumas C., Cock J.M.;
RT "Two large Arabidopsis thaliana gene families are homologous to the
RT Brassica gene superfamily that encodes pollen coat proteins and the
RT male component of the self-incompatibility response.";
RL Plant Mol. Biol. 46:17-34(2001).
RN [4]
RP GENE FAMILY.
RX PubMed=15955924; DOI=10.1104/pp.105.060079;
RA Silverstein K.A.T., Graham M.A., Paape T.D., VandenBosch K.A.;
RT "Genome organization of more than 300 defensin-like genes in
RT Arabidopsis.";
RL Plant Physiol. 138:600-610(2005).
CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the DEFL family. {ECO:0000305}.
DR EMBL; AP000377; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002686; AEE76806.1; -; Genomic_DNA.
DR RefSeq; NP_001030752.1; NM_001035675.2.
DR ProteinModelPortal; P82631; -.
DR SMR; P82631; -.
DR PaxDb; P82631; -.
DR EnsemblPlants; AT3G23727.1; AT3G23727.1; AT3G23727.
DR GeneID; 3768911; -.
DR Gramene; AT3G23727.1; AT3G23727.1; AT3G23727.
DR KEGG; ath:AT3G23727; -.
DR TAIR; AT3G23727; -.
DR HOGENOM; HOG000154274; -.
DR PhylomeDB; P82631; -.
DR PRO; PR:P82631; -.
DR Proteomes; UP000006548; Chromosome 3.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
DR GO; GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW.
DR GO; GO:0031640; P:killing of cells of other organism; IEA:UniProtKB-KW.
PE 3: Inferred from homology;
KW Antimicrobial; Complete proteome; Disulfide bond; Fungicide;
KW Plant defense; Reference proteome; Secreted; Signal.
FT SIGNAL 1 27 {ECO:0000255}.
FT CHAIN 28 92 Putative defensin-like protein 251.
FT /FTId=PRO_0000031938.
FT DISULFID 34 90 {ECO:0000250}.
FT DISULFID 45 69 {ECO:0000250}.
FT DISULFID 53 82 {ECO:0000250}.
FT DISULFID 67 84 {ECO:0000250}.
SQ SEQUENCE 92 AA; 10876 MW; 67C070B5A85B746F CRC64;
MRCVTSFVVF CILMFFVLNI FTVEVKAQRL VPLCKTIGYE NPGKCPADGN KFCRRKLDDR
YVKYKRCDCQ DTKGRKQNHH RCICYMKLPC NQ
//
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