MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | RecName: Full=Putative defensin-like protein 139; AltName: Full=Putative low-molecular-weight cysteine-rich protein 7; Short=Protein LCR7; Flags: Precursor; |
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MyHits synonyms | DF139_ARATH , P82722 , C3EA8988B58328EF |
![]() Legends: 1, SIGNAL {ECO:0000255}; 2, CHAIN Putative defensin-like protein 139.
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ID DF139_ARATH Reviewed; 84 AA. AC P82722; DT 13-APR-2004, integrated into UniProtKB/Swiss-Prot. DT 01-OCT-2002, sequence version 1. DT 18-JAN-2017, entry version 70. DE RecName: Full=Putative defensin-like protein 139; DE AltName: Full=Putative low-molecular-weight cysteine-rich protein 7; DE Short=Protein LCR7; DE Flags: Precursor; GN Name=LCR7; OrderedLocusNames=At4g19035; ORFNames=F13C5; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; OC Arabidopsis. OX NCBI_TaxID=3702 {ECO:0000305}; RN [1] {ECO:0000305} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX PubMed=10617198; DOI=10.1038/47134; RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., RA Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., RA Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., RA Weichselgartner M., de Simone V., Obermaier B., Mache R., Mueller M., RA Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., RA Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., RA Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., RA Langham S.-A., McCullagh B., Bilham L., Robben J., RA van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., RA Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., RA Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., RA Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., RA Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., RA De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., RA van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., RA Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., RA Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., RA Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., RA Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., RA Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., RA Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., RA Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., RA Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., RA Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., RA Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., RA Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., RA Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., RA Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., RA Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., RA Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., RA Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., RA Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., RA Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., RA Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., RA Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., RA Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., RA Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., RA Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., RA Chen E., Marra M.A., Martienssen R., McCombie W.R.; RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis RT thaliana."; RL Nature 402:769-777(1999). RN [2] RP GENOME REANNOTATION. RC STRAIN=cv. Columbia; RG The Arabidopsis Information Resource (TAIR); RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. RN [3] {ECO:0000305} RP IDENTIFICATION. RX PubMed=11437247; DOI=10.1023/A:1010664704926; RA Vanoosthuyse V., Miege C., Dumas C., Cock J.M.; RT "Two large Arabidopsis thaliana gene families are homologous to the RT Brassica gene superfamily that encodes pollen coat proteins and the RT male component of the self-incompatibility response."; RL Plant Mol. Biol. 46:17-34(2001). RN [4] RP GENE FAMILY. RX PubMed=15955924; DOI=10.1104/pp.105.060079; RA Silverstein K.A.T., Graham M.A., Paape T.D., VandenBosch K.A.; RT "Genome organization of more than 300 defensin-like genes in RT Arabidopsis."; RL Plant Physiol. 138:600-610(2005). CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}. CC -!- SIMILARITY: Belongs to the DEFL family. {ECO:0000305}. DR EMBL; AL021711; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; AL161550; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR EMBL; CP002687; AEE84128.1; -; Genomic_DNA. DR ProteinModelPortal; P82722; -. DR PaxDb; P82722; -. DR KEGG; ath:AT4G19035; -. DR TAIR; AT4G19035; -. DR HOGENOM; HOG000113296; -. DR OMA; MENCYEI; -. DR OrthoDB; EOG09361D1B; -. DR PhylomeDB; P82722; -. DR PRO; PR:P82722; -. DR Proteomes; UP000006548; Chromosome 4. DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell. DR GO; GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW. DR GO; GO:0031640; P:killing of cells of other organism; IEA:UniProtKB-KW. DR InterPro; IPR010851; SLR1_pollen-bd. DR Pfam; PF07333; SLR1-BP; 1. PE 3: Inferred from homology; KW Antimicrobial; Complete proteome; Disulfide bond; Fungicide; KW Plant defense; Reference proteome; Secreted; Signal. FT SIGNAL 1 28 {ECO:0000255}. FT CHAIN 29 84 Putative defensin-like protein 139. FT /FTId=PRO_0000206203. FT DISULFID 37 81 {ECO:0000250}. FT DISULFID 46 65 {ECO:0000250}. FT DISULFID 51 75 {ECO:0000250}. FT DISULFID 55 77 {ECO:0000250}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 33 81 ipfam:SLR1-BP [T] SQ SEQUENCE 84 AA; 9525 MW; C3EA8988B58328EF CRC64; MEPSNQIFFY LRRSKLLSGL GEIRMAKGQP LGTMERCYDM LTWGECVPDN CAFSCALKRH GKGGCIKAYD NRPACVCYYT CLRS // |