MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | RecName: Full=Defensin-like protein 100; Flags: Precursor; |
MyHits synonyms | DF100_ARATH , Q3E6U0 , A0MJT5 , O49626 , 8DED26A3BA180455 |
Legends: 1, SIGNAL {ECO:0000255}.
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ID DF100_ARATH Reviewed; 87 AA. AC Q3E6U0; A0MJT5; O49626; DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot. DT 08-NOV-2005, sequence version 1. DT 30-NOV-2016, entry version 60. DE RecName: Full=Defensin-like protein 100; DE Flags: Precursor; GN OrderedLocusNames=At4g22217; ORFNames=T10I14.9; OS Arabidopsis thaliana (Mouse-ear cress). OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; OC Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; OC Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; OC Arabidopsis. OX NCBI_TaxID=3702; RN [1] RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=cv. Columbia; RX PubMed=10617198; DOI=10.1038/47134; RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., RA Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., RA Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., RA Weichselgartner M., de Simone V., Obermaier B., Mache R., Mueller M., RA Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., RA Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., RA Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., RA Langham S.-A., McCullagh B., Bilham L., Robben J., RA van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., RA Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., RA Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., RA Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., RA Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., RA De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., RA van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., RA Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., RA Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., RA Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., RA Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., RA Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., RA Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., RA Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., RA Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., RA Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., RA Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., RA Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., RA Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., RA Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., RA Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., RA Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., RA Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., RA Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., RA Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., RA Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., RA Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., RA Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., RA Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., RA Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., RA Chen E., Marra M.A., Martienssen R., McCombie W.R.; RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis RT thaliana."; RL Nature 402:769-777(1999). RN [2] RP GENOME REANNOTATION. RC STRAIN=cv. Columbia; RG The Arabidopsis Information Resource (TAIR); RL Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases. RN [3] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=cv. Columbia; RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x; RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.; RT "Simultaneous high-throughput recombinational cloning of open reading RT frames in closed and open configurations."; RL Plant Biotechnol. J. 4:317-324(2006). RN [4] RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. RC STRAIN=cv. Columbia; RX PubMed=17565583; DOI=10.1111/j.1365-313X.2007.03136.x; RA Silverstein K.A.T., Moskal W.A. Jr., Wu H.C., Underwood B.A., RA Graham M.A., Town C.D., VandenBosch K.A.; RT "Small cysteine-rich peptides resembling antimicrobial peptides have RT been under-predicted in plants."; RL Plant J. 51:262-280(2007). RN [5] RP GENE FAMILY. RX PubMed=15955924; DOI=10.1104/pp.105.060079; RA Silverstein K.A.T., Graham M.A., Paape T.D., VandenBosch K.A.; RT "Genome organization of more than 300 defensin-like genes in RT Arabidopsis."; RL Plant Physiol. 138:600-610(2005). CC -!- SUBCELLULAR LOCATION: Secreted {ECO:0000250}. CC -!- SIMILARITY: Belongs to the DEFL family. {ECO:0000305}. CC -!- SEQUENCE CAUTION: CC Sequence=ABK27945.1; Type=Erroneous termination; Positions=88; Note=Translated as stop.; Evidence={ECO:0000305}; CC Sequence=CAA16771.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 4 genes: At4g22210, At4g22212, At4g22214 and At4g22217.; Evidence={ECO:0000305}; CC Sequence=CAB79176.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 4 genes: At4g22210, At4g22212, At4g22214 and At4g22217.; Evidence={ECO:0000305}; DR EMBL; AL021712; CAA16771.1; ALT_SEQ; Genomic_DNA. DR EMBL; AL161556; CAB79176.1; ALT_SEQ; Genomic_DNA. DR EMBL; CP002687; AEE84575.1; -; Genomic_DNA. DR EMBL; DQ446860; ABE66084.1; -; mRNA. DR EMBL; DQ912234; ABK27945.1; ALT_SEQ; mRNA. DR EMBL; EF182820; -; NOT_ANNOTATED_CDS; mRNA. DR PIR; T04902; T04902. DR RefSeq; NP_567655.1; NM_118346.3. DR UniGene; At.54471; -. DR ProteinModelPortal; Q3E6U0; -. DR SMR; Q3E6U0; -. DR STRING; 3702.AT4G22217.1; -. DR PaxDb; Q3E6U0; -. DR EnsemblPlants; AT4G22217.1; AT4G22217.1; AT4G22217. DR GeneID; 828315; -. DR Gramene; AT4G22217.1; AT4G22217.1; AT4G22217. DR KEGG; ath:AT4G22217; -. DR TAIR; AT4G22217; -. DR HOGENOM; HOG000113304; -. DR OMA; CKESCIK; -. DR OrthoDB; EOG09361A2Q; -. DR PhylomeDB; Q3E6U0; -. DR PRO; PR:Q3E6U0; -. DR Proteomes; UP000006548; Chromosome 4. DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell. DR GO; GO:0050832; P:defense response to fungus; IEA:UniProtKB-KW. DR GO; GO:0031640; P:killing of cells of other organism; IEA:UniProtKB-KW. DR InterPro; IPR020191; LMW_cysteine-rich. DR ProDom; PD032890; LMW_cysteine-rich; 1. PE 3: Inferred from homology; KW Antimicrobial; Complete proteome; Disulfide bond; Fungicide; KW Plant defense; Reference proteome; Secreted; Signal. FT SIGNAL 1 29 {ECO:0000255}. FT CHAIN 30 87 Defensin-like protein 100. FT /FTId=PRO_0000379663. FT DISULFID 31 79 {ECO:0000250}. FT DISULFID 38 64 {ECO:0000250}. FT DISULFID 44 76 {ECO:0000250}. FT DISULFID 48 78 {ECO:0000250}. SQ SEQUENCE 87 AA; 9695 MW; 8DED26A3BA180455 CRC64; MRSLRLRTVV VATIVVCLSV LLSPTEVDGS CDFPLGACTP FRDCKESCIK FKTRAGQTFF DGKCRPRDRP SVWTACFCCY YDSIGAQ // |