Entry sw:CRPM3_ARATH

ID   CRPM3_ARATH             Reviewed;         189 AA.
AC   O64834; B3H4D1;
DT   28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
DT   01-AUG-1998, sequence version 1.
DT   30-NOV-2016, entry version 82.
DE   RecName: Full=Cold-regulated 413 plasma membrane protein 3;
DE            Short=AtCOR413-PM3;
GN   OrderedLocusNames=At2g23680; ORFNames=F26B6.33;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
OC   Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L.,
RA   Moffat K.S., Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L.,
RA   Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H.,
RA   Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D.,
RA   Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M.,
RA   Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis
RT   thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RG   The Arabidopsis Information Resource (TAIR);
RL   Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC   STRAIN=cv. Columbia;
RX   PubMed=11910074; DOI=10.1126/science.1071006;
RA   Seki M., Narusaka M., Kamiya A., Ishida J., Satou M., Sakurai T.,
RA   Nakajima M., Enju A., Akiyama K., Oono Y., Muramatsu M.,
RA   Hayashizaki Y., Kawai J., Carninci P., Itoh M., Ishii Y., Arakawa T.,
RA   Shibata K., Shinagawa A., Shinozaki K.;
RT   "Functional annotation of a full-length Arabidopsis cDNA collection.";
RL   Science 296:141-145(2002).
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass
CC       membrane protein {ECO:0000250}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=O64834-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=O64834-2; Sequence=VSP_044489;
CC         Note=Derived from EST data. No experimental confirmation
CC         available.;
CC   -!- SIMILARITY: Belongs to the Cold-regulated 413 protein family.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AV824982; Type=Frameshift; Positions=95; Evidence={ECO:0000305};
DR   EMBL; AC003040; AAM14866.1; -; Genomic_DNA.
DR   EMBL; AC004482; AAC17100.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC07479.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC07480.1; -; Genomic_DNA.
DR   EMBL; AV824982; -; NOT_ANNOTATED_CDS; mRNA.
DR   PIR; T02423; T02423.
DR   RefSeq; NP_001118373.1; NM_001124901.2. [O64834-2]
DR   RefSeq; NP_179948.1; NM_127931.3. [O64834-1]
DR   UniGene; At.27155; -.
DR   ProteinModelPortal; O64834; -.
DR   BioGrid; 2251; 1.
DR   STRING; 3702.AT2G23680.1; -.
DR   PaxDb; O64834; -.
DR   EnsemblPlants; AT2G23680.1; AT2G23680.1; AT2G23680. [O64834-1]
DR   GeneID; 816899; -.
DR   Gramene; AT2G23680.1; AT2G23680.1; AT2G23680.
DR   KEGG; ath:AT2G23680; -.
DR   TAIR; AT2G23680; -.
DR   HOGENOM; HOG000239742; -.
DR   OMA; HTKACGG; -.
DR   OrthoDB; EOG09360RWR; -.
DR   PhylomeDB; O64834; -.
DR   PRO; PR:O64834; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   Genevisible; O64834; AT.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0016020; C:membrane; IDA:TAIR.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   InterPro; IPR008892; COR413.
DR   Pfam; PF05562; WCOR413; 1.
PE   2: Evidence at transcript level;
KW   Alternative splicing; Cell membrane; Complete proteome; Membrane;
KW   Reference proteome; Transmembrane; Transmembrane helix.
FT   CHAIN        25    189       Cold-regulated 413 plasma membrane
FT                                protein 3.
FT                                /FTId=PRO_0000420442.
FT   TOPO_DOM      1     24       Extracellular. {ECO:0000255}.
FT   TRANSMEM     25     45       Helical. {ECO:0000255}.
FT   TOPO_DOM     46     55       Cytoplasmic. {ECO:0000255}.
FT   TRANSMEM     56     76       Helical. {ECO:0000255}.
FT   TOPO_DOM     77     79       Extracellular. {ECO:0000255}.
FT   TRANSMEM     80    100       Helical. {ECO:0000255}.
FT   TOPO_DOM    101    104       Cytoplasmic. {ECO:0000255}.
FT   TRANSMEM    105    125       Helical. {ECO:0000255}.
FT   TOPO_DOM    126    168       Extracellular. {ECO:0000255}.
FT   TRANSMEM    169    189       Helical. {ECO:0000255}.
FT   VAR_SEQ       1     42       Missing (in isoform 2). {ECO:0000305}.
FT                                /FTId=VSP_044489.
CC   --------------------------------------------------------------------------
CC   The following FT lines are automated annotations from the MyHits database.
CC   --------------------------------------------------------------------------
FT   MYHIT        12    171       ipfam:WCOR413 [T]
SQ   SEQUENCE   189 AA;  21368 MW;  EBC357847DFC09B7 CRC64;
     MENIEYLNEI QAVAGKLIHS YGVPVMITLF LRWLASIVAV FLMILDQTKW KYSNNIMASL
     LAPYLFSSLP IVIFQVLRNG VGKWIALLTV ILRLFLPNHF HESLEIPGAT ILLIVVTPSD
     IGAIFRDDLR YTGGDVCLLT SFYLINKHTK ACGGIKNSFT QKDKVTYSIC LWILFVYPIL
     SSFAALFYL
//