ID Q58EB2_DANRE Unreviewed; 534 AA.
AC Q58EB2;
DT 26-APR-2005, integrated into UniProtKB/TrEMBL.
DT 26-APR-2005, sequence version 1.
DT 10-MAY-2017, entry version 105.
DE SubName: Full=Immunoglobulin-like and fibronectin type III domain-containing 1, tandem duplicate 1 {ECO:0000313|Ensembl:ENSDARP00000109777};
DE SubName: Full=Zgc:113358 {ECO:0000313|EMBL:AAH91997.1};
GN Name=igfn1.1 {ECO:0000313|Ensembl:ENSDARP00000109777,
GN ECO:0000313|ZFIN:ZDB-GENE-050327-30};
GN ORFNames=zgc:113358 {ECO:0000313|EMBL:AAH91997.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAH91997.1};
RN [1] {ECO:0000313|EMBL:AAH91997.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Singapore local strain {ECO:0000313|EMBL:AAH91997.1};
RC TISSUE=Embryo {ECO:0000313|EMBL:AAH91997.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000109777}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000109777};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000109777, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000109777,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
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DR EMBL; CABZ01055257; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CABZ01055258; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CABZ01055259; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CABZ01055260; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CABZ01055261; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CABZ01055262; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CABZ01055263; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CABZ01055264; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CU634018; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC091997; AAH91997.1; -; mRNA.
DR RefSeq; NP_001014339.1; NM_001014317.2.
DR UniGene; Dr.162025; -.
DR Ensembl; ENSDART00000129301; ENSDARP00000109777; ENSDARG00000005526.
DR GeneID; 541504; -.
DR KEGG; dre:541504; -.
DR CTD; 541504; -.
DR ZFIN; ZDB-GENE-050327-30; igfn1.1.
DR eggNOG; ENOG410INW6; Eukaryota.
DR eggNOG; ENOG410YB5P; LUCA.
DR GeneTree; ENSGT00860000133685; -.
DR HOGENOM; HOG000137493; -.
DR Proteomes; UP000000437; Chromosome 6.
DR Bgee; ENSDARG00000005526; -.
DR Gene3D; 2.60.40.10; -; 4.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR013098; Ig_I-set.
DR InterPro; IPR003599; Ig_sub.
DR InterPro; IPR003598; Ig_sub2.
DR Pfam; PF07679; I-set; 3.
DR SMART; SM00409; IG; 4.
DR SMART; SM00408; IGc2; 2.
DR SUPFAM; SSF48726; SSF48726; 4.
DR PROSITE; PS50835; IG_LIKE; 2.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 43 133 Ig-like (immunoglobulin-like).
FT {ECO:0000259|PROSITE:PS50835}.
FT DOMAIN 443 531 Ig-like (immunoglobulin-like).
FT {ECO:0000259|PROSITE:PS50835}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 43 134 ipfam:I-set [T]
FT MYHIT 235 323 ismart:IG [T]
FT MYHIT 331 412 ismart:IG [T]
FT MYHIT 327 400 ipfam:I-set [T]
FT MYHIT 443 532 ipfam:I-set [T]
FT MYHIT 43 133 iprf:IG_LIKE [T]
FT MYHIT 443 531 iprf:IG_LIKE [T]
FT MYHIT 55 124 ismart:IGc2 [T]
FT MYHIT 49 135 ismart:IG [T]
FT MYHIT 455 522 ismart:IGc2 [T]
FT MYHIT 449 533 ismart:IG [T]
SQ SEQUENCE 534 AA; 60303 MW; E053700B72EF4314 CRC64;
MMKKAKVLDP TAAGQGGIKR RSKVPGVMIT QYVEELPEGM TTPDFTRKPI ALTIQEGKLA
IFKAKVTGSP TPTVTWRRAK GEMNDLQRFQ SKFDPTTNEH TLEIPKVRSD DADTYKCYAS
NEYGKAVCTV VLNIIEVGFK KDKEMQKAEG APAGDPTEFR KRLRQGAGKK VEEKKEGDID
ESVWELLLSA EKKDYERICA EYHITDFRHM LKKLVEMKKE REEEQAQFIQ HLSNLKPIEV
KSEDAATFEL EMELKDPNSR IFLYKDGVMI PFSKEAEGEM KHCLKQVGKK YVFTVKNLKA
EDAGIYQVDV EGVNIFSTDF KIPPVDFALK IKEVTAQERE DALFECVLTQ PMNEIVWTLK
NVPISNSEKY EITSTEDKLI HRLKIIDCMP LDAGIYAAIA GIKSCNAWLI VEADKDPASK
GKKKEKFTLN IPESKTCNLE SAPRFMVPLK IHTAPQGYEC YMSCAVRGDP TPHVTWYHNN
VSLNTNINYL ITNTCGVCSM LILRVGAKDM GEYKVIAENP LGRAECSTNL AVRE
//
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