MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | RecName: Full=Zinc finger protein 414; |
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| MyHits synonyms | ZN414_RAT , Q5PPH4 , 0988FF9C3263345B |
 Legends: 1, ZN_FING C2H2-type 1. {ECO:0000255|PROSITE- ProRule:PRU00042}; 2, ZN_FING C2H2-type 2. {ECO:0000255|PROSITE- ProRule:PRU00042}; 3, ZN_FING C2H2-type 3; degenerate. {ECO:0000255|PROSITE-ProRule:PRU00042}; 4, iprf:ZINC_FINGER_C2H2_2 [T]; 5, ipat:ZINC_FINGER_C2H2_1 [T]; 6, ismart:ZnF_C2H2 [T].
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ID ZN414_RAT Reviewed; 299 AA.
AC Q5PPH4;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
DT 04-JAN-2005, sequence version 1.
DT 10-MAY-2017, entry version 88.
DE RecName: Full=Zinc finger protein 414;
GN Name=Znf414; Synonyms=Zfp414;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Muridae; Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Ovary;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: May be involved in transcriptional regulation.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the krueppel C2H2-type zinc-finger protein
CC family. {ECO:0000305}.
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DR EMBL; BC087693; AAH87693.1; -; mRNA.
DR RefSeq; NP_001009664.1; NM_001009664.1.
DR UniGene; Rn.32868; -.
DR ProteinModelPortal; Q5PPH4; -.
DR STRING; 10116.ENSRNOP00000011094; -.
DR PaxDb; Q5PPH4; -.
DR Ensembl; ENSRNOT00000011094; ENSRNOP00000011094; ENSRNOG00000008378.
DR GeneID; 299647; -.
DR KEGG; rno:299647; -.
DR UCSC; RGD:1308123; rat.
DR CTD; 328801; -.
DR RGD; 1308123; Zfp414.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00390000006876; -.
DR HOGENOM; HOG000015387; -.
DR HOVERGEN; HBG083015; -.
DR InParanoid; Q5PPH4; -.
DR OMA; EGECPVF; -.
DR OrthoDB; EOG091G0DB2; -.
DR PhylomeDB; Q5PPH4; -.
DR TreeFam; TF337512; -.
DR PRO; PR:Q5PPH4; -.
DR Proteomes; UP000002494; Chromosome 7.
DR Bgee; ENSRNOG00000008378; -.
DR Genevisible; Q5PPH4; RN.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
DR InterPro; IPR031799; Znf-C2H2_ribbon.
DR InterPro; IPR013087; Znf_C2H2_type.
DR Pfam; PF15909; zf-C2H2_8; 1.
DR SMART; SM00355; ZnF_C2H2; 3.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 2: Evidence at transcript level;
KW Complete proteome; DNA-binding; Metal-binding; Nucleus;
KW Reference proteome; Repeat; Transcription; Transcription regulation;
KW Zinc; Zinc-finger.
FT CHAIN 1 299 Zinc finger protein 414.
FT /FTId=PRO_0000242165.
FT ZN_FING 99 123 C2H2-type 1. {ECO:0000255|PROSITE-
FT ProRule:PRU00042}.
FT ZN_FING 135 159 C2H2-type 2. {ECO:0000255|PROSITE-
FT ProRule:PRU00042}.
FT ZN_FING 166 190 C2H2-type 3; degenerate.
FT {ECO:0000255|PROSITE-ProRule:PRU00042}.
FT COMPBIAS 195 267 Pro-rich.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 99 128 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 166 195 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 100 197 ipfam:zf-C2H2_8 [T]
FT MYHIT 137 159 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 135 164 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 99 123 ismart:ZnF_C2H2 [T]
FT MYHIT 166 191 ismart:ZnF_C2H2 [T]
FT MYHIT 101 123 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 135 159 ismart:ZnF_C2H2 [T]
SQ SEQUENCE 299 AA; 31967 MW; 0988FF9C3263345B CRC64;
MEELSGPSSD TLATVESSSN EPDKEVASPD VAATATLSSV EEPGPNPTAT PPVWDRGGPL
QQVACPVPDS CQTSSTTRGV GTNEDLRLPR RRPPPGKQIP CSSPGCSLSF PSVRDLAQHL
RTHCPPTQSL EGKLFRCSAL SCTESFPSMQ ELVAHGKLHY KPNRYFKCEN CLLRFRTHRS
LFKHLHVCID HGQNPAPPPP PALDKEPPVP ERPPESDPSS SLGLPFPLLE PFTSAPTGPF
LPYLNPAPFG LSPPRLRPFL AATPGPPTSS TAIWKKSQGA TSSPRRPQGG SDAPSGACR
//
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