Entry euk:X1WCW8_DANRE

ID   X1WCW8_DANRE            Unreviewed;       263 AA.
AC   X1WCW8;
DT   14-MAY-2014, integrated into UniProtKB/TrEMBL.
DT   14-MAY-2014, sequence version 1.
DT   15-MAR-2017, entry version 20.
DE   SubName: Full=Zgc:136963 {ECO:0000313|Ensembl:ENSDARP00000128065};
DE   Flags: Fragment;
GN   ORFNames=zgc:136963 {ECO:0000313|Ensembl:ENSDARP00000128065,
GN   ECO:0000313|ZFIN:ZDB-GENE-060312-8};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000128065, ECO:0000313|Proteomes:UP000000437};
RN   [1] {ECO:0000313|Ensembl:ENSDARP00000128065, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000128065,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000128065}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000128065};
RG   Ensembl;
RL   Submitted (MAR-2014) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Golgi apparatus, Golgi stack membrane
CC       {ECO:0000256|RuleBase:RU003832}; Single-pass type II membrane
CC       protein {ECO:0000256|RuleBase:RU003832}.
CC   -!- SIMILARITY: Belongs to the glycosyltransferase 10 family.
CC       {ECO:0000256|RuleBase:RU003832, ECO:0000256|SAAS:SAAS00584577}.
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSDARP00000128065}.
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DR   EMBL; CU682360; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   STRING; 7955.ENSDARP00000111455; -.
DR   PaxDb; X1WCW8; -.
DR   Ensembl; ENSDART00000155995; ENSDARP00000128065; ENSDARG00000086603.
DR   ZFIN; ZDB-GENE-060312-8; zgc:136963.
DR   eggNOG; KOG2619; Eukaryota.
DR   eggNOG; ENOG410ZIMX; LUCA.
DR   GeneTree; ENSGT00680000099679; -.
DR   OMA; HEDYFTE; -.
DR   OrthoDB; EOG091G088Y; -.
DR   Proteomes; UP000000437; Chromosome 8.
DR   GO; GO:0032580; C:Golgi cisterna membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008417; F:fucosyltransferase activity; IEA:InterPro.
DR   GO; GO:0006486; P:protein glycosylation; IEA:InterPro.
DR   InterPro; IPR031481; Glyco_tran_10_N.
DR   InterPro; IPR001503; Glyco_trans_10.
DR   PANTHER; PTHR11929; PTHR11929; 1.
DR   Pfam; PF17039; Glyco_tran_10_N; 1.
DR   Pfam; PF00852; Glyco_transf_10; 1.
PE   3: Inferred from homology;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Glycosyltransferase {ECO:0000256|RuleBase:RU003832,
KW   ECO:0000256|SAAS:SAAS00118125};
KW   Golgi apparatus {ECO:0000256|RuleBase:RU003832};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW   Transferase {ECO:0000256|RuleBase:RU003832,
KW   ECO:0000256|SAAS:SAAS00118125};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     12     30       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       65    170       Glyco_tran_10_N.
FT                                {ECO:0000259|Pfam:PF17039}.
FT   NON_TER     263    263       {ECO:0000313|Ensembl:ENSDARP00000128065}.
CC   --------------------------------------------------------------------------
CC   The following FT lines are automated annotations from the MyHits database.
CC   --------------------------------------------------------------------------
FT   MYHIT       188    263       ipfam:Glyco_transf_10 [T]
FT   MYHIT        65    170       ipfam:Glyco_tran_10_N [T]
SQ   SEQUENCE   263 AA;  30944 MW;  7D3258780B254CC6 CRC64;
     MVTLTGVSLP RLVTMMVVAG LVSLTILYCW SSTPKNCPAP QTNPKQYIER YFGEKSDSPT
     GTPKEKPILL LWFWPQNYYF DFSDCKTIYD IDGCHLTDNR SLYDKSDDVL IFHRGIHWDL
     SNLPPSPRPR FQRWIWFNVE SPTNTAKIPG LENLFNLTLS YRHDSDILVR LRLRTRKKPE
     EDFVIPKKDK LVCWIVSNNL EWTGVGTRKK FFEEFSKHIN VTLFGKAYAK FLDYNEYYPT
     LASCKFYLSF ENSIHEDYFT EKI
//