Legends: 1, VARIANT L -> S (in strain: CC-503); 2, CONFLICT N -> W (in Ref. 1). {ECO:0000305}; 3, REGION S3-like 1st part; 4, REGION S3-like 2nd part; 5, VARIANT LCCY -> SVVD (in strain: CC-503); 6, ipfam:Ribosomal_S3_C [T]; 7, ipat:RIBOSOMAL_S3 [T].
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ID RR3_CHLRE Reviewed; 712 AA.
AC Q08365; B7U1I6;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2003, sequence version 2.
DT 10-MAY-2017, entry version 102.
DE RecName: Full=30S ribosomal protein S3, chloroplastic;
DE AltName: Full=ORF 712;
GN Name=rps3;
OS Chlamydomonas reinhardtii (Chlamydomonas smithii).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae;
OC Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.
OX NCBI_TaxID=3055;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=1617741; DOI=10.1007/BF00351664;
RA Fong S.E., Surzycki S.J.;
RT "Organization and structure of plastome psbF, psbL, petG and ORF712
RT genes in Chlamydomonas reinhardtii.";
RL Curr. Genet. 21:527-530(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CC-503;
RX PubMed=19473533; DOI=10.1186/1471-2148-9-120;
RA Smith D.R., Lee R.W.;
RT "Nucleotide diversity of the Chlamydomonas reinhardtii plastid genome:
RT addressing the mutational-hazard hypothesis.";
RL BMC Evol. Biol. 9:120-120(2009).
RN [3]
RP PROTEIN SEQUENCE OF 43-54; 105-121; 289-297; 349-360; 466-478;
RP 495-509; 521-535; 555-570; 571-584; 612-625 AND 691-702.
RC STRAIN=Arg7/cw15;
RX PubMed=12417713; DOI=10.1105/tpc.004341;
RA Yamaguchi K., Prieto S., Beligni M.V., Haynes P.A., McDonald W.H.,
RA Yates J.R. III, Mayfield S.P.;
RT "Proteomic characterization of the small subunit of Chlamydomonas
RT reinhardtii chloroplast ribosome: identification of a novel S1 domain-
RT containing protein and unusually large orthologs of bacterial S2, S3,
RT and S5.";
RL Plant Cell 14:2957-2974(2002).
RN [4]
RP IDENTIFICATION, AND COMPLETE PLASTID GENOME.
RX PubMed=12417694; DOI=10.1105/tpc.006155;
RA Maul J.E., Lilly J.W., Cui L., dePamphilis C.W., Miller W.,
RA Harris E.H., Stern D.B.;
RT "The Chlamydomonas reinhardtii plastid chromosome: islands of genes in
RT a sea of repeats.";
RL Plant Cell 14:2659-2679(2002).
RN [5]
RP CHARACTERIZATION.
RX PubMed=8262234; DOI=10.1016/0014-5793(93)80808-8;
RA Liu X.-Q., Huang C., Xu H.;
RT "The unusual rps3-like orf712 is functionally essential and
RT structurally conserved in Chlamydomonas.";
RL FEBS Lett. 336:225-230(1993).
CC -!- SUBUNIT: Part of the 30S ribosomal subunit.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- MISCELLANEOUS: The large insertion sequence is present in the
CC protein as found in ribosomes.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS3 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAA46980.1; Type=Miscellaneous discrepancy; Note=Sequencing errors.; Evidence={ECO:0000305};
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DR EMBL; X66250; CAA46980.1; ALT_SEQ; Genomic_DNA.
DR EMBL; FJ423446; ACJ50133.1; -; Genomic_DNA.
DR EMBL; BK000554; DAA00947.1; -; Genomic_DNA.
DR PIR; S26881; S26881.
DR RefSeq; NP_958402.1; NC_005353.1.
DR ProteinModelPortal; Q08365; -.
DR SMR; Q08365; -.
DR STRING; 3055.DAA00947; -.
DR PaxDb; Q08365; -.
DR PRIDE; Q08365; -.
DR EnsemblPlants; DAA00947; DAA00947; DAA00947.
DR GeneID; 2716997; -.
DR Gramene; DAA00947; DAA00947; DAA00947.
DR KEGG; cre:ChreCp046; -.
DR eggNOG; ENOG410J9TH; Eukaryota.
DR eggNOG; COG0092; LUCA.
DR InParanoid; Q08365; -.
DR Proteomes; UP000006906; Chloroplast.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.30.300.20; -; 1.
DR HAMAP; MF_01309_B; Ribosomal_S3_B; 1.
DR InterPro; IPR015946; KH_dom-like_a/b.
DR InterPro; IPR009019; KH_prok-type.
DR InterPro; IPR005704; Ribosomal_S3_bac.
DR InterPro; IPR001351; Ribosomal_S3_C.
DR InterPro; IPR018280; Ribosomal_S3_CS.
DR PANTHER; PTHR11760:SF29; PTHR11760:SF29; 1.
DR Pfam; PF00189; Ribosomal_S3_C; 1.
DR SUPFAM; SSF54814; SSF54814; 1.
DR SUPFAM; SSF54821; SSF54821; 1.
DR TIGRFAMs; TIGR01009; rpsC_bact; 1.
DR PROSITE; PS00548; RIBOSOMAL_S3; 1.
PE 1: Evidence at protein level;
KW Chloroplast; Complete proteome; Direct protein sequencing; Plastid;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1 712 30S ribosomal protein S3, chloroplastic.
FT /FTId=PRO_0000130275.
FT REGION 1 118 S3-like 1st part.
FT REGION 119 580 Intervening sequence (IVS).
FT REGION 581 712 S3-like 2nd part.
FT VARIANT 428 431 LCCY -> SVVD (in strain: CC-503).
FT VARIANT 436 436 L -> S (in strain: CC-503).
FT CONFLICT 292 292 N -> W (in Ref. 1). {ECO:0000305}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 619 705 ipfam:Ribosomal_S3_C [T]
FT MYHIT 1 709 ihamap:Ribosomal_S3_B [T]
FT MYHIT 666 700 ipat:RIBOSOMAL_S3 [T]
SQ SEQUENCE 712 AA; 81855 MW; 6818382B9239B142 CRC64;
MGQKVHPLGF RVGITKKHQS QWFARFQKYA YSQSVFEDHM LRTTLVNLFS NLEKESALAT
KQSKNRGATQ PKAPKITQIK IERGLIPYEI GIQIHSNDCL SITKAIDNIK VSKDLVTNLQ
KTRKYLFKAG TQLKNASMQV SDNLNVAEGE NSTMLKTKTS ASGTSVLKKR TFKIQTQKPT
KGKFVFKGKR KQKKKLSKAV FMRLKNIKRR FKKRQTIKKR YLNIISKGLL IRKKGNLIIR
NVKIKRKNKT ARLTSRKSQP TLRSGSNLRD NLAPVKSKMQ RFNNRMSKKF ANLFLTKLNK
QFLVRLKAIM KFWHNQNVTK APLGYNKKWS LAKSYALINN LKAKYLAKDI LSLGSLRVQK
LRKLISILEK KSLVKMETLR KDFITFGTLS KTRAFGYYQM ITFLKQLKEL VTKIKKQTIA
NVTTKQELCC YNKLALNKTK IQNLIRAKSK QTKSITQKVV NNFVKLVDDN QAMANESRKI
KWISYLKDLV NKHRTENIFY YLATIATARK DLNALKRYTK QHANFLFGVN VENAKENPNA
LLQRVTKTLT QYSKNPLVNN DFENAEGLTK LQTAFLTQIE SQRKMYKANL ALTPKISIKF
FSVKTTNLLE KASTVADSIV DALEKRKAFR GVIKKAKEDL MLRSRVTRVK GVKIQVAGRL
NGAEIARSEW VRAGRVPLQT LRANIDYAYR TANTIYGIIG VKVWIFKGYS KI
//
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