ID R4GDQ3_DANRE Unreviewed; 448 AA.
AC R4GDQ3;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 10-MAY-2017, entry version 32.
DE SubName: Full=Zinc finger protein 1053 {ECO:0000313|Ensembl:ENSDARP00000133229};
GN Name=znf1053 {ECO:0000313|Ensembl:ENSDARP00000133229,
GN ECO:0000313|ZFIN:ZDB-GENE-121214-1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000133229, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000133229, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000133229,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000133229}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000133229};
RG Ensembl;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000133229}.
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DR EMBL; BX000477; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CR925768; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_017211055.1; XM_017355566.1.
DR UniGene; Dr.128845; -.
DR Ensembl; ENSDART00000168536; ENSDARP00000133229; ENSDARG00000098270.
DR GeneID; 100150608; -.
DR KEGG; dre:100150608; -.
DR CTD; 100150608; -.
DR ZFIN; ZDB-GENE-121214-1; znf1053.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00870000136971; -.
DR OMA; CEMAINW; -.
DR OrthoDB; EOG091G02KC; -.
DR Proteomes; UP000000437; Chromosome 4.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 13.
DR SUPFAM; SSF57667; SSF57667; 7.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 13.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 13.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 82 109 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 110 137 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 138 165 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 166 193 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 194 221 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 222 249 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 250 277 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 278 305 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 306 333 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 334 361 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 362 386 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 390 417 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 418 445 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 222 249 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 306 328 ismart:ZnF_C2H2 [T]
FT MYHIT 280 300 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 362 386 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 82 109 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 418 440 ismart:ZnF_C2H2 [T]
FT MYHIT 250 272 ismart:ZnF_C2H2 [T]
FT MYHIT 82 104 ismart:ZnF_C2H2 [T]
FT MYHIT 224 244 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 112 132 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 138 165 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 362 384 ismart:ZnF_C2H2 [T]
FT MYHIT 196 216 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 140 160 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 390 412 ismart:ZnF_C2H2 [T]
FT MYHIT 334 356 ismart:ZnF_C2H2 [T]
FT MYHIT 166 188 ismart:ZnF_C2H2 [T]
FT MYHIT 392 412 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 252 272 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 364 384 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 84 104 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 420 440 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 194 216 ismart:ZnF_C2H2 [T]
FT MYHIT 138 160 ismart:ZnF_C2H2 [T]
FT MYHIT 110 137 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 336 356 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 166 193 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 278 300 ismart:ZnF_C2H2 [T]
FT MYHIT 194 221 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 308 328 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 306 333 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 110 132 ismart:ZnF_C2H2 [T]
FT MYHIT 278 305 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 390 417 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 168 188 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 334 361 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 250 277 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 222 244 ismart:ZnF_C2H2 [T]
FT MYHIT 418 445 iprf:ZINC_FINGER_C2H2_2 [T]
SQ SEQUENCE 448 AA; 51671 MW; 8A3C96C3E927B078 CRC64;
MVFIKEESED VKIEETFTVK QEDLQEQTDR MVLKEETHEQ NEIDEKLLFE KPQEITTDEK
PTLTKKTSSH GRPRKSKSGC NFSCKQCRKS FNQKSNLHVH LRVHTWEKPY TCKQCGKSFS
QIQGFKVHMR IHTGESKFTC QECGKSFYHA GNFAAHMRIH TGEKPFSCKQ CGKSFSQKPN
LDIHMRIHTG EKPFSCKQCG KSFSQKSHLD IHMRVHTGEK PYTCEQCGQS FSQKQSFKSH
MRIHTGERPY TCQQCGKNFR HARNLAAHMR IHTGEKPFSC KQCGKSFSKK ANLIAHMRVH
TREKPYTCEQ CGKSLGKKQD LYIHMRIHTG EKPYTCTECG KSFPHITTLK HHVRTHTGEK
PFACAQCGKS FTTKASLKNH MNCHTGTIVF TCDQCGKSLT RKDSIKKHMK IHSGEDHFRC
SECGKGFKRK RSLNTHLKLH NGEQSPQN
//
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