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Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7

DescriptionSubName: Full=Cold acclimation protein COR413-PM1 {ECO:0000313|EMBL:AAO24629.1}; SubName: Full=Cold-regulated 413 plasma membrane protein 2 {ECO:0000313|EMBL:ONM09769.1};
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MyHits synonymsQ84LB4_MAIZE , Q84LB4 , 09861699B214CA49
match map segment
ipfam:WCOR413  
Legends: 1, TRANSMEM Helical. {ECO:0000256|SAM:Phobius}. 
ID   Q84LB4_MAIZE            Unreviewed;       212 AA.
AC   Q84LB4;
DT   01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT   01-JUN-2003, sequence version 1.
DT   10-MAY-2017, entry version 50.
DE   SubName: Full=Cold acclimation protein COR413-PM1 {ECO:0000313|EMBL:AAO24629.1};
DE   SubName: Full=Cold-regulated 413 plasma membrane protein 2 {ECO:0000313|EMBL:ONM09769.1};
GN   ORFNames=ZEAMMB73_Zm00001d034188 {ECO:0000313|EMBL:ONM09769.1};
OS   Zea mays (Maize).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
OC   PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae;
OC   Zea.
OX   NCBI_TaxID=4577 {ECO:0000313|EMBL:AAO24629.1};
RN   [1] {ECO:0000313|EMBL:AAO24629.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Crown leaf {ECO:0000313|EMBL:AAO24629.1};
RX   PubMed=12746512; DOI=10.1104/pp.102.015255;
RA   Breton G., Danyluk J., Charron J.B., Sarhan F.;
RT   "Expression profiling and bioinformatic analyses of a novel stress-
RT   regulated multispanning transmembrane protein family from cereals and
RT   Arabidopsis.";
RL   Plant Physiol. 132:64-74(2003).
RN   [2] {ECO:0000313|EMBL:ACR34711.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=B73 {ECO:0000313|EMBL:ACR34711.1};
RX   PubMed=19936069; DOI=10.1371/journal.pgen.1000740;
RA   Soderlund C., Descour A., Kudrna D., Bomhoff M., Boyd L., Currie J.,
RA   Angelova A., Collura K., Wissotski M., Ashley E., Morrow D.,
RA   Fernandes J., Walbot V., Yu Y.;
RT   "Sequencing, mapping, and analysis of 27,455 maize full-length
RT   cDNAs.";
RL   PLoS Genet. 5:E1000740-E1000740(2009).
RN   [3] {ECO:0000313|EMBL:ONM09769.1, ECO:0000313|Proteomes:UP000007305}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. B73 {ECO:0000313|Proteomes:UP000007305};
RC   TISSUE=Seedling {ECO:0000313|EMBL:ONM09769.1};
RG   Maize Genome Sequencing Project;
RA   Ware D.;
RT   "Update maize B73 reference genome by single molecule sequencing
RT   technologies.";
RL   Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EnsemblPlants:Zm00001d034188_T001}
RP   IDENTIFICATION.
RC   STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001d034188_T001};
RG   EnsemblPlants;
RL   Submitted (OCT-2016) to UniProtKB.
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DR   EMBL; AY181208; AAO24629.1; -; mRNA.
DR   EMBL; BT084358; ACR34711.1; -; mRNA.
DR   EMBL; CM007647; ONM09769.1; -; Genomic_DNA.
DR   EMBL; CM007647; ONM09771.1; -; Genomic_DNA.
DR   RefSeq; NP_001105202.1; NM_001111732.1.
DR   UniGene; Zm.1459; -.
DR   STRING; 4577.GRMZM2G040030_P01; -.
DR   EnsemblPlants; Zm00001d034188_T001; Zm00001d034188_T001; Zm00001d034188.
DR   EnsemblPlants; Zm00001d034188_T004; Zm00001d034188_T004; Zm00001d034188.
DR   GeneID; 542099; -.
DR   Gramene; Zm00001d034188_T001; Zm00001d034188_T001; Zm00001d034188.
DR   Gramene; Zm00001d034188_T004; Zm00001d034188_T004; Zm00001d034188.
DR   KEGG; zma:542099; -.
DR   eggNOG; ENOG410IVQJ; Eukaryota.
DR   eggNOG; ENOG4111SCF; LUCA.
DR   OMA; HEHINAS; -.
DR   OrthoDB; EOG09360RWR; -.
DR   Proteomes; UP000007305; Chromosome 1.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR008892; COR413.
DR   Pfam; PF05562; WCOR413; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000007305};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     46     72       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     84    102       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    130    148       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    154    170       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    190    208       Helical. {ECO:0000256|SAM:Phobius}.
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CC   The following FT lines are automated annotations from the MyHits database.
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FT   MYHIT        22    199       ipfam:WCOR413 [T]
SQ   SEQUENCE   212 AA;  23044 MW;  09861699B214CA49 CRC64;
     MGKGFASYLA MKTGPEGGDA AAAQQALIDA DLRELGVAAR KLANHAFVLG GGLGFGTSFL
     KWLAFLAAVY LLILDRTNWK TNMLTALLVP YIFFTLPNVL FSLIRGEVGK WIAIIAVILR
     LFFPRHFPDW LELPGSIILL TVVAPSLFAD SFRGDLVGVF ICLVIGCYLL QEHIKASGGF
     RNAFRKGNGV SNSIGILLLF IYPVWAGVLQ VL
//