MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 933 {ECO:0000313|Ensembl:ENSMUSP00000101343}; |
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| MyHits synonyms | Q6PEE4_MOUSE , Q6PEE4 , 0B20BEF353702D42 |
 Legends: 1, KRAB. {ECO:0000259|PROSITE:PS50805}; 2, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 3, ipat:ZINC_FINGER_C2H2_1 [T]; 4, ismart:ZnF_C2H2 [T]; 5, iprf:ZINC_FINGER_C2H2_2 [T]; 6, ipfam:KRAB [T].
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ID Q6PEE4_MOUSE Unreviewed; 468 AA.
AC Q6PEE4;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 10-MAY-2017, entry version 131.
DE SubName: Full=Zinc finger protein 933 {ECO:0000313|Ensembl:ENSMUSP00000101343};
GN Name=Zfp933 {ECO:0000313|Ensembl:ENSMUSP00000101343,
GN ECO:0000313|MGI:MGI:1922865};
GN Synonyms=2810408P10Rik {ECO:0000313|EMBL:AAH58101.1};
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Muridae; Murinae; Mus; Mus.
OX NCBI_TaxID=10090 {ECO:0000313|EMBL:AAH58101.1};
RN [1] {ECO:0000313|EMBL:AAH58101.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=C57BL/6 {ECO:0000313|EMBL:AAH58101.1};
RC TISSUE=Brain {ECO:0000313|EMBL:AAH58101.1};
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RA Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H.,
RA Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M.,
RA Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S.,
RA Feolo M., Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F.,
RA Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J.,
RA Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N.,
RA Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B.,
RA Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B.,
RA Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S.,
RA Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R.,
RA Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L.,
RA Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E.,
RA Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J.,
RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D.,
RA Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G.,
RA Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J.,
RA Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L.,
RA Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D.,
RA Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A.,
RA Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S.,
RA Makowski K.A., Bosak S., Malek J.;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [2] {ECO:0000313|Ensembl:ENSMUSP00000101343, ECO:0000313|Proteomes:UP000000589}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000101343,
RC ECO:0000313|Proteomes:UP000000589};
RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
RA She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
RA Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
RA Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
RA Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
RA Lindblad-Toh K., Eichler E.E., Ponting C.P.;
RT "Lineage-specific biology revealed by a finished genome assembly of
RT the mouse.";
RL PLoS Biol. 7:E1000112-E1000112(2009).
RN [3] {ECO:0000313|Ensembl:ENSMUSP00000101343}
RP IDENTIFICATION.
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000101343};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
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DR EMBL; AL607066; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC058101; AAH58101.1; -; mRNA.
DR RefSeq; NP_941021.1; NM_198619.2.
DR UniGene; Mm.332053; -.
DR STRING; 10090.ENSMUSP00000101343; -.
DR Ensembl; ENSMUST00000105718; ENSMUSP00000101343; ENSMUSG00000059423.
DR GeneID; 242747; -.
DR KEGG; mmu:242747; -.
DR UCSC; uc008vtc.1; mouse.
DR CTD; 242747; -.
DR MGI; MGI:1922865; Zfp933.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00760000119089; -.
DR HOVERGEN; HBG018163; -.
DR KO; K09228; -.
DR OMA; NGHLIIH; -.
DR OrthoDB; EOG091G02KC; -.
DR TreeFam; TF338854; -.
DR Proteomes; UP000000589; Chromosome 4.
DR Bgee; ENSMUSG00000059423; -.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IBA:GO_Central.
DR CDD; cd07765; KRAB_A-box; 1.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR001909; KRAB.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR Pfam; PF01352; KRAB; 1.
DR SMART; SM00349; KRAB; 1.
DR SMART; SM00355; ZnF_C2H2; 12.
DR SUPFAM; SSF109640; SSF109640; 1.
DR SUPFAM; SSF57667; SSF57667; 8.
DR PROSITE; PS50805; KRAB; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 12.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 13.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000589};
KW Metal-binding {ECO:0000256|SAAS:SAAS00780264};
KW Reference proteome {ECO:0000313|Proteomes:UP000000589};
KW Repeat {ECO:0000256|SAAS:SAAS00780289};
KW Zinc {ECO:0000256|SAAS:SAAS00780264};
KW Zinc-finger {ECO:0000256|SAAS:SAAS00780264}.
FT DOMAIN 4 87 KRAB. {ECO:0000259|PROSITE:PS50805}.
FT DOMAIN 75 102 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 131 158 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 159 186 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 187 214 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 215 242 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 243 270 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 271 298 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 299 326 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 327 354 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 355 382 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 383 410 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 411 438 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 439 466 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 189 209 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 271 293 ismart:ZnF_C2H2 [T]
FT MYHIT 385 405 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 411 438 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 243 265 ismart:ZnF_C2H2 [T]
FT MYHIT 215 237 ismart:ZnF_C2H2 [T]
FT MYHIT 161 181 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 299 321 ismart:ZnF_C2H2 [T]
FT MYHIT 327 354 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 159 186 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 383 405 ismart:ZnF_C2H2 [T]
FT MYHIT 441 461 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 133 153 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 439 466 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 383 410 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 187 209 ismart:ZnF_C2H2 [T]
FT MYHIT 273 293 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 271 298 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 357 377 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 439 461 ismart:ZnF_C2H2 [T]
FT MYHIT 159 181 ismart:ZnF_C2H2 [T]
FT MYHIT 4 44 ipfam:KRAB [T]
FT MYHIT 4 66 ismart:KRAB [T]
FT MYHIT 245 265 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 355 382 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 131 153 ismart:ZnF_C2H2 [T]
FT MYHIT 4 87 iprf:KRAB [T]
FT MYHIT 75 102 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 243 270 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 187 214 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 327 349 ismart:ZnF_C2H2 [T]
FT MYHIT 215 242 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 413 433 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 217 237 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 411 433 ismart:ZnF_C2H2 [T]
FT MYHIT 299 326 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 329 349 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 355 377 ismart:ZnF_C2H2 [T]
FT MYHIT 131 158 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 301 321 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 468 AA; 55120 MW; 0B20BEF353702D42 CRC64;
MDAVSYDDVH VNFTQEEWVL LDPSQKSLYK DVMLETYRNL SAIGYNWEAH PTEEHCQSSR
RRGRHERSPT GEEPYECNKS GKAFAYHHYP QWHERIHTGE KPYEVIQYGE DFVYHSSLQI
YKRIAIGEKP YECNQCGKAF TYHSQLRRHK RTHTGEKPYK CNQCDKAFSQ NGHLIIHKRT
HTGEKPYECN QCGKAFTDQS QLRIHKRAHT GEKPYKCNQC DKAFLQNINL RIHKRAHTGE
KPYKCNQCDK AFAQNGHLII HKRTHTGEKP YECNQCGKAF ADQSQLRIHR RIHTGEKPYK
CNQCDKAFAQ HSNLRIHKRT HTGEKPYECN QCDKAFLQNI NLKIHKRAHT GEKSYECSQC
GKAFARYYHL QCHERIHTEE KPYKCNQCDK VFSQSHSLQI HKRTHTGEKP YVCNQCGKAF
ADNSHLRRHK RTHTGEKPYE CNQCGSAFSQ NSYLRIHKRT HTGEKHFE
//
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