MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 740 {ECO:0000313|Ensembl:ENSXETP00000053907}; SubName: Full=Znf740 protein {ECO:0000313|EMBL:AAH76952.1}; Flags: Fragment; |
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| MyHits synonyms | Q6DEZ1_XENTR , Q6DEZ1 , E4F16D8CFAC6AE15 |
 Legends: 1, NON_TER {ECO:0000313|EMBL:AAH76952.1}; 2, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 3, ipat:ZINC_FINGER_C2H2_1 [T]; 4, iprf:ZINC_FINGER_C2H2_2 [T]; 5, ismart:ZnF_C2H2 [T].
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ID Q6DEZ1_XENTR Unreviewed; 191 AA.
AC Q6DEZ1;
DT 16-AUG-2004, integrated into UniProtKB/TrEMBL.
DT 16-AUG-2004, sequence version 1.
DT 10-MAY-2017, entry version 75.
DE SubName: Full=Zinc finger protein 740 {ECO:0000313|Ensembl:ENSXETP00000053907};
DE SubName: Full=Znf740 protein {ECO:0000313|EMBL:AAH76952.1};
DE Flags: Fragment;
GN Name=znf740 {ECO:0000313|EMBL:AAH76952.1,
GN ECO:0000313|Ensembl:ENSXETP00000053907};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC Silurana.
OX NCBI_TaxID=8364 {ECO:0000313|EMBL:AAH76952.1};
RN [1] {ECO:0000313|EMBL:AAH76952.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo {ECO:0000313|EMBL:AAH76952.1};
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSXETP00000053907}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nigerian {ECO:0000313|Ensembl:ENSXETP00000053907};
RX PubMed=20431018; DOI=10.1126/science.1183670;
RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J.,
RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L.,
RA Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E.,
RA Detter J.C., Fletcher R., Gerhard D.S., Goodstein D., Graves T.,
RA Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M.,
RA Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N.,
RA Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D.,
RA Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B.,
RA Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M.,
RA Rokhsar D.S.;
RT "The genome of the Western clawed frog Xenopus tropicalis.";
RL Science 328:633-636(2010).
RN [3] {ECO:0000313|Ensembl:ENSXETP00000053907}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
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DR EMBL; AAMC01060398; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC076952; AAH76952.1; -; mRNA.
DR UniGene; Str.45827; -.
DR STRING; 8364.ENSXETP00000053907; -.
DR Ensembl; ENSXETT00000053907; ENSXETP00000053907; ENSXETG00000025177.
DR Xenbase; XB-GENE-1219010; znf740.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00530000063238; -.
DR HOGENOM; HOG000013198; -.
DR HOVERGEN; HBG061583; -.
DR OMA; PEENIQV; -.
DR OrthoDB; EOG091G0L6G; -.
DR Proteomes; UP000008143; Unassembled WGS sequence.
DR Bgee; ENSXETG00000025177; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; SSF57667; 2.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000008143};
KW Reference proteome {ECO:0000313|Proteomes:UP000008143}.
FT DOMAIN 99 126 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 127 154 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 155 182 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT NON_TER 1 1 {ECO:0000313|EMBL:AAH76952.1}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 129 149 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 155 182 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 127 154 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 101 121 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 99 121 ismart:ZnF_C2H2 [T]
FT MYHIT 155 175 ismart:ZnF_C2H2 [T]
FT MYHIT 127 149 ismart:ZnF_C2H2 [T]
FT MYHIT 99 126 iprf:ZINC_FINGER_C2H2_2 [T]
SQ SEQUENCE 191 AA; 22033 MW; E4F16D8CFAC6AE15 CRC64;
KGSGAAGEVG SEAKSGYTAL YKSKRGKEEK TMQHTETSRN KRPEGSARER SSSSIKAQQK
ETGNGLLDPN QATQASKSHK KAYLTDENAS YSFSMHRSYI CEHCYGAFRS SYHLKRHQYI
HTGERPYECD MCEMKFIQKY HLDRHKRVHS GEKPYQCERC QQAFSRTDRL LRHKRMCQGC
QSKIGETDYM L
//
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