ID Q5PR92_DANRE Unreviewed; 186 AA.
AC Q5PR92;
DT 04-JAN-2005, integrated into UniProtKB/TrEMBL.
DT 04-JAN-2005, sequence version 1.
DT 10-MAY-2017, entry version 107.
DE SubName: Full=Intraflagellar transport 27 homolog (Chlamydomonas) {ECO:0000313|Ensembl:ENSDARP00000131706};
DE SubName: Full=Zgc:101893 {ECO:0000313|EMBL:AAH86752.1};
GN Name=ift27 {ECO:0000313|Ensembl:ENSDARP00000131706,
GN ECO:0000313|ZFIN:ZDB-GENE-041212-9};
GN Synonyms=rabl4 {ECO:0000313|ZFIN:ZDB-GENE-041212-9},
GN zgc:101893 {ECO:0000313|EMBL:AAH86752.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAH86752.1};
RN [1] {ECO:0000313|EMBL:AAH86752.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Larvae {ECO:0000313|EMBL:AAH86752.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (DEC-2004) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000131706}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131706};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [3] {ECO:0000313|Ensembl:ENSDARP00000131706}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000131706};
RG Ensembl;
RL Submitted (NOV-2015) to UniProtKB.
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DR EMBL; BC086752; AAH86752.1; -; mRNA.
DR RefSeq; NP_001008588.1; NM_001008588.1.
DR UniGene; Dr.37833; -.
DR STRING; 7955.ENSDARP00000053179; -.
DR Ensembl; ENSDART00000162865; ENSDARP00000131706; ENSDARG00000099279.
DR GeneID; 494045; -.
DR KEGG; dre:494045; -.
DR CTD; 11020; -.
DR ZFIN; ZDB-GENE-041212-9; ift27.
DR eggNOG; KOG0079; Eukaryota.
DR eggNOG; ENOG4111IWZ; LUCA.
DR GeneTree; ENSGT00870000136549; -.
DR HOGENOM; HOG000258604; -.
DR HOVERGEN; HBG105393; -.
DR KO; K07934; -.
DR OMA; FHCLAKQ; -.
DR OrthoDB; EOG091G0WL1; -.
DR TreeFam; TF329292; -.
DR Reactome; R-DRE-5620924; Intraflagellar transport.
DR Proteomes; UP000000437; Unplaced.
DR Bgee; ENSDARG00000036612; -.
DR GO; GO:0005929; C:cilium; IEA:GOC.
DR GO; GO:0005768; C:endosome; IBA:GO_Central.
DR GO; GO:0005794; C:Golgi apparatus; IBA:GO_Central.
DR GO; GO:0005525; F:GTP binding; IEA:InterPro.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0060271; P:cilium assembly; IGI:ZFIN.
DR GO; GO:0042073; P:intraciliary transport; IEA:InterPro.
DR GO; GO:0001822; P:kidney development; IGI:ZFIN.
DR GO; GO:1902908; P:regulation of melanosome transport; IMP:ZFIN.
DR CDD; cd04101; RabL4; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR034112; RabL4_euk.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR001806; Small_GTPase.
DR Pfam; PF00071; Ras; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR TIGRFAMs; TIGR00231; small_GTP; 1.
PE 1: Evidence at protein level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Proteomics identification {ECO:0000213|PeptideAtlas:Q5PR92};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 8 170 ipfam:Ras [T]
SQ SEQUENCE 186 AA; 20453 MW; 3C030FE247BD9655 CRC64;
MVKLRARCVV VGDAAVGKST LCQMFCSDGA VYQKNYTMNV GVELLEKTVP IPDTSDSVEL
FIYDSAGREL FSDACENVWS QPSVVCVVFD VTSEASFNNC SRWIDRVQTH SHGLHTPGVL
VGNKCDLTSR REVDAAAAQA FAQTHTLQYH ETSAKEIGHY EAPFLSLAAA FHSLYQEQKN
SILSLI
//
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