ID Q5BLD1_DANRE Unreviewed; 237 AA.
AC Q5BLD1;
DT 12-APR-2005, integrated into UniProtKB/TrEMBL.
DT 12-APR-2005, sequence version 1.
DT 10-MAY-2017, entry version 73.
DE SubName: Full=Transmembrane protein 86A {ECO:0000313|Ensembl:ENSDARP00000064645};
DE SubName: Full=Zgc:113571 {ECO:0000313|EMBL:AAH90488.1};
GN Name=tmem86a {ECO:0000313|Ensembl:ENSDARP00000064645,
GN ECO:0000313|ZFIN:ZDB-GENE-050320-81};
GN Synonyms=zgc:113571 {ECO:0000313|EMBL:AAH90488.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAH90488.1};
RN [1] {ECO:0000313|EMBL:AAH90488.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Singapore local strain {ECO:0000313|EMBL:AAH90488.1};
RC TISSUE=Embryo {ECO:0000313|EMBL:AAH90488.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000064645}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000064645};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000064645, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000064645,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
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DR EMBL; CT573392; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC090488; AAH90488.1; -; mRNA.
DR RefSeq; NP_001013530.1; NM_001013512.2.
DR UniGene; Dr.87456; -.
DR STRING; 7955.ENSDARP00000064645; -.
DR Ensembl; ENSDART00000064646; ENSDARP00000064645; ENSDARG00000044034.
DR GeneID; 541385; -.
DR KEGG; dre:541385; -.
DR CTD; 144110; -.
DR ZFIN; ZDB-GENE-050320-81; tmem86a.
DR eggNOG; KOG4804; Eukaryota.
DR eggNOG; ENOG410ZQJ5; LUCA.
DR GeneTree; ENSGT00390000007101; -.
DR HOGENOM; HOG000204433; -.
DR HOVERGEN; HBG055092; -.
DR OMA; ANDLWTW; -.
DR OrthoDB; EOG091G0LBR; -.
DR TreeFam; TF324663; -.
DR Proteomes; UP000000437; Chromosome 25.
DR Bgee; ENSDARG00000044034; -.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR012506; YhhN.
DR Pfam; PF07947; YhhN; 1.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 37 59 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 71 87 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 93 113 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 120 139 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 145 162 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 174 195 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 207 225 Helical. {ECO:0000256|SAM:Phobius}.
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CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 39 223 ipfam:YhhN [T]
SQ SEQUENCE 237 AA; 26056 MW; 39BF75019542233B CRC64;
MVSPVTVVKS EGPKLVPFFK ATCVYFVLWL PTSSPSWFSA LIKCLPIFCL WVFLLAHGIN
FLGAHSSARK ILAGLIFSAL GDAFLIWQEQ GYFSHGLLMF AITHILYSSA FGMKPLNSRA
GLIIAVISGF SYTLLYPYLS GPFTYLVAVY IALIGFMGWR AIAGVQFAND LWTWTKLSAC
LGAVLFMVSD LTIAVNKFCF PVPHSRAIIM ATYYAAQMLI ALSAVECQDA DTSWKSA
//
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