ID Q566W5_DANRE Unreviewed; 255 AA.
AC Q566W5;
DT 10-MAY-2005, integrated into UniProtKB/TrEMBL.
DT 10-MAY-2005, sequence version 1.
DT 10-MAY-2017, entry version 78.
DE SubName: Full=FSHD region gene 1 {ECO:0000313|Ensembl:ENSDARP00000073458};
DE SubName: Full=Zgc:112426 {ECO:0000313|EMBL:AAH93300.1};
GN Name=frg1 {ECO:0000313|Ensembl:ENSDARP00000073458,
GN ECO:0000313|ZFIN:ZDB-GENE-050417-324};
GN ORFNames=zgc:112426 {ECO:0000313|EMBL:AAH93300.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAH93300.1};
RN [1] {ECO:0000313|EMBL:AAH93300.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Olfactory epithelium {ECO:0000313|EMBL:AAH93300.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000073458}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000073458};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000073458, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000073458,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
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DR EMBL; CU570993; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC093300; AAH93300.1; -; mRNA.
DR RefSeq; NP_001017793.1; NM_001017793.1.
DR UniGene; Dr.15984; -.
DR STRING; 7955.ENSDARP00000073458; -.
DR DNASU; 550491; -.
DR Ensembl; ENSDART00000079001; ENSDARP00000073458; ENSDARG00000056504.
DR GeneID; 550491; -.
DR KEGG; dre:550491; -.
DR CTD; 2483; -.
DR ZFIN; ZDB-GENE-050417-324; frg1.
DR eggNOG; KOG3962; Eukaryota.
DR eggNOG; ENOG411009G; LUCA.
DR GeneTree; ENSGT00390000004552; -.
DR HOGENOM; HOG000007130; -.
DR HOVERGEN; HBG018564; -.
DR KO; K13122; -.
DR OMA; NSCFISY; -.
DR OrthoDB; EOG091G0M4K; -.
DR TreeFam; TF314108; -.
DR Proteomes; UP000000437; Chromosome 1.
DR Bgee; ENSDARG00000056504; -.
DR GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0055120; C:striated muscle dense body; IBA:GO_Central.
DR GO; GO:0051015; F:actin filament binding; IBA:GO_Central.
DR InterPro; IPR008999; Actin_cross-linking.
DR InterPro; IPR010414; FRG1.
DR PANTHER; PTHR12928; PTHR12928; 1.
DR Pfam; PF06229; FRG1; 1.
DR SUPFAM; SSF50405; SSF50405; 1.
PE 1: Evidence at protein level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Proteomics identification {ECO:0000213|PeptideAtlas:Q566W5};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 65 253 ipfam:FRG1 [T]
SQ SEQUENCE 255 AA; 28780 MW; A17EEEA59F5B905B CRC64;
MAEYTHVKST KLVLKGSNDK KKKKNKDKKR KRDDGEDKLD IVGGWWTVKC FGEVTGTVAI
EMHKNSYIHA LDTGLFTVGS PHKEDEGPDP PEQFTAIKLS DSRIALKSGY GKYLGINSEG
VVVGRSDAIG SREQWEPVFQ NGKMALLAAN SCFISYSESG DIVAKNKTAG EEEMIKIRSC
TEREVKRKDD IADEDRGDVK NCELNYVKKF QSFQDRKLRL NEEDSGSLKK ARTDGKFHEA
LLDRRSKMKA DRYCK
//
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