Entry euk:Q501V7_DANRE

ID   Q501V7_DANRE            Unreviewed;       325 AA.
AC   Q501V7;
DT   07-JUN-2005, integrated into UniProtKB/TrEMBL.
DT   07-JUN-2005, sequence version 1.
DT   10-MAY-2017, entry version 92.
DE   SubName: Full=Zgc:112965 {ECO:0000313|EMBL:AAH95853.1, ECO:0000313|Ensembl:ENSDARP00000026304};
GN   ORFNames=zgc:112965 {ECO:0000313|EMBL:AAH95853.1,
GN   ECO:0000313|Ensembl:ENSDARP00000026304,
GN   ECO:0000313|ZFIN:ZDB-GENE-050522-10};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|EMBL:AAH95853.1};
RN   [1] {ECO:0000313|EMBL:AAH95853.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=Singapore local strain {ECO:0000313|EMBL:AAH95853.1};
RC   TISSUE=Embryo {ECO:0000313|EMBL:AAH95853.1};
RG   NIH - Zebrafish Gene Collection (ZGC) project;
RL   Submitted (MAY-2005) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000026304}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000026304};
RG   Ensembl;
RL   Submitted (JUN-2011) to UniProtKB.
RN   [3] {ECO:0000313|Ensembl:ENSDARP00000026304, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000026304,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
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DR   EMBL; CU210890; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; BC095853; AAH95853.1; -; mRNA.
DR   RefSeq; NP_001018542.1; NM_001020706.1.
DR   UniGene; Dr.86941; -.
DR   Ensembl; ENSDART00000016351; ENSDARP00000026304; ENSDARG00000007787.
DR   GeneID; 553735; -.
DR   KEGG; dre:553735; -.
DR   ZFIN; ZDB-GENE-050522-10; zgc:112965.
DR   eggNOG; ENOG410J0B2; Eukaryota.
DR   eggNOG; ENOG41120TD; LUCA.
DR   GeneTree; ENSGT00870000136499; -.
DR   HOGENOM; HOG000205089; -.
DR   OMA; NERSWGA; -.
DR   OrthoDB; EOG091G0SOW; -.
DR   TreeFam; TF335062; -.
DR   Proteomes; UP000000437; Chromosome 3.
DR   Bgee; ENSDARG00000007787; -.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   Gene3D; 2.60.40.10; -; 2.
DR   InterPro; IPR007110; Ig-like_dom.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR003599; Ig_sub.
DR   InterPro; IPR003598; Ig_sub2.
DR   InterPro; IPR013106; Ig_V-set.
DR   Pfam; PF07686; V-set; 2.
DR   SMART; SM00409; IG; 2.
DR   SMART; SM00408; IGc2; 2.
DR   SMART; SM00406; IGv; 2.
DR   SUPFAM; SSF48726; SSF48726; 2.
DR   PROSITE; PS50835; IG_LIKE; 2.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    266    290       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       15    138       Ig-like (immunoglobulin-like).
FT                                {ECO:0000259|PROSITE:PS50835}.
FT   DOMAIN      144    258       Ig-like (immunoglobulin-like).
FT                                {ECO:0000259|PROSITE:PS50835}.
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CC   The following FT lines are automated annotations from the MyHits database.
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FT   MYHIT       152    260       ismart:IG [T]
FT   MYHIT       162    246       ismart:IGv [T]
FT   MYHIT        46    127       ismart:IGv [T]
FT   MYHIT        36    135       ipfam:V-set [T]
FT   MYHIT        42    132       ismart:IGc2 [T]
FT   MYHIT        36    141       ismart:IG [T]
FT   MYHIT       144    258       iprf:IG_LIKE [T]
FT   MYHIT       151    248       ipfam:V-set [T]
FT   MYHIT       158    251       ismart:IGc2 [T]
FT   MYHIT        15    138       iprf:IG_LIKE [T]
SQ   SEQUENCE   325 AA;  36518 MW;  7D900E8516142AFD CRC64;
     MLVLFNFAYL KMHQPKIVLM TVMLMIADGL VVRGPSAPLS APLGASVVLP CYVDEALPVE
     DLEVEWRRAD SETLVHLYQD GESRAEVQQQ DYHDRAHFFT EEIQHGNFSL RLDNLTAQDE
     GEYRCRVHSQ QDSEETVIKI KDVERLLVSG TNRSVSIHVG EDVTLNCSVD SHITPEHIEE
     VLWRKTDKDG DILILLYQNN KTVPEVGDEQ FRGRVEFFTA EIPKGNFSLK LKSVRTEDKG
     VYMCQVFAGD LSANATVVLG RLSFSALHTM VLILCISACG SALLPCVWIY SRSPDKGQWH
     VQLSVFGLFD CNNLSFCLGS IFTTC
//