ID Q4V8J3_RAT Unreviewed; 276 AA.
AC Q4V8J3;
DT 05-JUL-2005, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2005, sequence version 1.
DT 10-MAY-2017, entry version 94.
DE SubName: Full=Similar to Zinc finger protein OZF (POZF-1) {ECO:0000313|EMBL:AAH97363.1};
DE SubName: Full=Zinc finger protein 772 {ECO:0000313|Ensembl:ENSRNOP00000031196};
GN Name=Zfp772 {ECO:0000313|Ensembl:ENSRNOP00000031196,
GN ECO:0000313|RGD:1308782};
GN Synonyms=RGD1308782 {ECO:0000313|EMBL:AAH97363.1},
GN Zfp978 {ECO:0000313|RGD:1308782};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Muridae; Murinae; Rattus.
OX NCBI_TaxID=10116 {ECO:0000313|EMBL:AAH97363.1};
RN [1] {ECO:0000313|EMBL:AAH97363.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Placenta {ECO:0000313|EMBL:AAH97363.1};
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RA Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H.,
RA Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M.,
RA Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S.,
RA Feolo M., Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F.,
RA Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J.,
RA Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N.,
RA Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B.,
RA Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B.,
RA Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S.,
RA Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R.,
RA Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L.,
RA Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E.,
RA Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J.,
RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D.,
RA Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G.,
RA Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J.,
RA Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L.,
RA Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D.,
RA Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A.,
RA Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S.,
RA Makowski K.A., Bosak S., Malek J.;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [2] {ECO:0000313|Ensembl:ENSRNOP00000031196, ECO:0000313|Proteomes:UP000002494}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000031196,
RC ECO:0000313|Proteomes:UP000002494};
RX PubMed=15057822; DOI=10.1038/nature02426;
RG Rat Genome Sequencing Project Consortium;
RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
RA Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
RA Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
RA Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
RA Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
RA Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
RA Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
RA Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
RA Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
RA D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
RA Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
RA Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
RA Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
RA Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
RA Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
RA Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
RA Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
RA Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
RA Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
RA Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
RA Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
RA Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
RA Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
RA Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
RA Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
RA Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
RA Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
RA Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
RA Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
RA Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
RA Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
RA Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
RA Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
RA Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
RA Collins F.S.;
RT "Genome sequence of the Brown Norway rat yields insights into
RT mammalian evolution.";
RL Nature 428:493-521(2004).
RN [3] {ECO:0000313|Ensembl:ENSRNOP00000031196}
RP IDENTIFICATION.
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000031196};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
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DR EMBL; AABR07002249; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC097363; AAH97363.1; -; mRNA.
DR RefSeq; NP_001020848.1; NM_001025677.1.
DR UniGene; Rn.143807; -.
DR STRING; 10116.ENSRNOP00000031196; -.
DR Ensembl; ENSRNOT00000030259; ENSRNOP00000031196; ENSRNOG00000015598.
DR GeneID; 308318; -.
DR KEGG; rno:308318; -.
DR UCSC; RGD:1308782; rat.
DR CTD; 108168963; -.
DR RGD; 1308782; Zfp772.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00840000130494; -.
DR HOGENOM; HOG000234617; -.
DR HOVERGEN; HBG018163; -.
DR Proteomes; UP000002494; Chromosome 1.
DR Bgee; ENSRNOG00000015598; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 8.
DR SUPFAM; SSF57667; SSF57667; 4.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 8.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 8.
PE 2: Evidence at transcript level;
KW Complete proteome {ECO:0000313|Proteomes:UP000002494};
KW Reference proteome {ECO:0000313|Proteomes:UP000002494}.
FT DOMAIN 53 80 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 81 108 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 109 136 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 137 164 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 165 192 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 193 220 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 221 248 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 249 276 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 109 136 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 251 271 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 223 243 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 137 164 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 221 243 ismart:ZnF_C2H2 [T]
FT MYHIT 83 103 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 53 75 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 53 80 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 249 271 ismart:ZnF_C2H2 [T]
FT MYHIT 165 187 ismart:ZnF_C2H2 [T]
FT MYHIT 165 192 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 109 131 ismart:ZnF_C2H2 [T]
FT MYHIT 53 75 ismart:ZnF_C2H2 [T]
FT MYHIT 81 108 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 193 215 ismart:ZnF_C2H2 [T]
FT MYHIT 167 187 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 193 220 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 139 159 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 249 276 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 137 159 ismart:ZnF_C2H2 [T]
FT MYHIT 81 103 ismart:ZnF_C2H2 [T]
FT MYHIT 111 131 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 221 248 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 195 215 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 276 AA; 31326 MW; BAD9578E0B62D814 CRC64;
MLCCAETPLL STDNVTILQT SSSLLRHQVT YTAGDTPMNT ESGEAIQSEK KNCICSDCGK
TFTSTSHLNR HRMIHTGEKP FQCSECGMSF SQKAFLIKHF RIHTGEKPFR CGECGKAFKH
NISLVSHQRV HTGETPFTCT ECGKSYMTRS NLTRHFQVHA SEKPYSCSEC GKAFKEKSSL
IYHARVHTRE RPFQCSDCGK SFSQKAFLIK HFRVHTGEKP FRCSECGKAF KHNCFLVAHQ
RVHTGETPFT CTECGKSYMN RSSLLYHYRV HTGEKP
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