ID Q29RB1_DANRE Unreviewed; 781 AA.
AC Q29RB1;
DT 04-APR-2006, integrated into UniProtKB/TrEMBL.
DT 04-APR-2006, sequence version 1.
DT 10-MAY-2017, entry version 76.
DE SubName: Full=Component of oligomeric golgi complex 4 {ECO:0000313|Ensembl:ENSDARP00000070899};
DE SubName: Full=Zgc:136860 {ECO:0000313|EMBL:AAI14293.1};
GN Name=cog4 {ECO:0000313|Ensembl:ENSDARP00000070899,
GN ECO:0000313|ZFIN:ZDB-GENE-060312-33};
GN Synonyms=zgc:136860 {ECO:0000313|EMBL:AAI14293.1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI14293.1};
RN [1] {ECO:0000313|EMBL:AAI14293.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Whole {ECO:0000313|EMBL:AAI14293.1};
RG NIH - Zebrafish Gene Collection (ZGC) project;
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000070899}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000070899};
RG Ensembl;
RL Submitted (FEB-2012) to UniProtKB.
RN [3] {ECO:0000313|Ensembl:ENSDARP00000070899, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000070899,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
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DR EMBL; CR376738; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CR848675; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; BC114292; AAI14293.1; -; mRNA.
DR RefSeq; NP_001034912.1; NM_001039823.1.
DR UniGene; Dr.75313; -.
DR STRING; 7955.ENSDARP00000070899; -.
DR Ensembl; ENSDART00000076425; ENSDARP00000070899; ENSDARG00000054264.
DR GeneID; 569049; -.
DR KEGG; dre:569049; -.
DR CTD; 25839; -.
DR ZFIN; ZDB-GENE-060312-33; cog4.
DR eggNOG; KOG0412; Eukaryota.
DR eggNOG; ENOG410XS60; LUCA.
DR GeneTree; ENSGT00390000003662; -.
DR HOGENOM; HOG000006874; -.
DR HOVERGEN; HBG031403; -.
DR KO; K20291; -.
DR OMA; GYYITME; -.
DR OrthoDB; EOG091G02P2; -.
DR TreeFam; TF105835; -.
DR Reactome; R-DRE-6807878; COPI-mediated anterograde transport.
DR Reactome; R-DRE-6811438; Intra-Golgi traffic.
DR Proteomes; UP000000437; Chromosome 7.
DR Bgee; ENSDARG00000054264; -.
DR GO; GO:0017119; C:Golgi transport complex; IBA:GO_Central.
DR GO; GO:0007030; P:Golgi organization; IBA:GO_Central.
DR GO; GO:0048213; P:Golgi vesicle prefusion complex stabilization; IBA:GO_Central.
DR GO; GO:0000301; P:retrograde transport, vesicle recycling within Golgi; IBA:GO_Central.
DR GO; GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IBA:GO_Central.
DR InterPro; IPR013167; COG_su4.
DR Pfam; PF08318; COG4; 1.
DR SMART; SM00762; Cog4; 1.
PE 1: Evidence at protein level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Proteomics identification {ECO:0000213|PeptideAtlas:Q29RB1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 180 490 Cog4. {ECO:0000259|SMART:SM00762}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 180 490 ismart:Cog4 [T]
FT MYHIT 180 488 ipfam:COG4 [T]
SQ SEQUENCE 781 AA; 87587 MW; F286FFB8E18CDD5A CRC64;
MEEAASPARR RGGPAGVSAV QTDTIEALTE LEDLERVYAQ LCAEEAEVQV ELDALVGQQN
NIETKMLSLQ RMGPNLQLIE GDAVQLSGMI NFTCSLAENV SSKVRQLDLT KKRLYQAIQR
ADDILDLKFC TDGVQTALRN QDYEQAAAHI HRYLSLDQSV IELSKQGGEG SAVEASLALL
QEAERNLKTL VTTRLEEAVA TGDLPQVERF FKILPLLGLH EQGLARFAQY LCSQLASKAE
ENLILAVGSD LGERRAPVIF ADTLTLLLEG IARIVETHQP IVETYYGPGR LHTLLAHLQK
ECDKQAQKIV DKFIQQRDYN NKFQVVQSNM MRGMTTDKIE PRDLDPVLCE VTLMNSRAEL
YFRFLRRRIV ADFEVADAMA DEAVIQEHQQ SLEQLLKNCQ LSRTMQELIG YYIPMEEYYM
RESVNKAVAM DTAEVGQLSS SVVDDVFYIV KKCISRALTS SSSDCVCAMI NHATSVLETD
FREVLVCKLR AGYPVSALQD LQRGVSSAVS LMQSSLQQGK ITNLTQTLGI ESQEQAKSAY
LVTLNNVEVC SENISTLKKN LESDCAKLFS QGASSDHAKE KIDSCLSDLV NTSSKFKDLL
QEGLQELNNT AIRPQVKPWI SSFLSVSHNI EEEEFSEYEA NDPFVQQLIV QLEQLMAEFK
VGLSPVIYDT LTSLMTSLIA MEMEKTVFKC TFSRLGGLQF DKELRALVAY LSSVTSWTIR
DKFARLTQMA TILNLERVSE ILDYWGPNSG PLTWRLTPAE VRQVLALRVD FRSEDIKRLR
L
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