Entry euk:Q0P447_DANRE

ID   Q0P447_DANRE            Unreviewed;       248 AA.
AC   Q0P447;
DT   19-SEP-2006, integrated into UniProtKB/TrEMBL.
DT   19-SEP-2006, sequence version 1.
DT   10-MAY-2017, entry version 81.
DE   SubName: Full=Ring finger protein 182 {ECO:0000313|Ensembl:ENSDARP00000081081};
DE   SubName: Full=Zgc:153414 {ECO:0000313|EMBL:AAI22280.1};
GN   Name=rnf182 {ECO:0000313|Ensembl:ENSDARP00000081081,
GN   ECO:0000313|ZFIN:ZDB-GENE-060825-49};
GN   ORFNames=zgc:153414 {ECO:0000313|EMBL:AAI22280.1};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|EMBL:AAI22280.1};
RN   [1] {ECO:0000313|EMBL:AAI22280.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Eye {ECO:0000313|EMBL:AAI22280.1};
RG   NIH - Zebrafish Gene Collection (ZGC) project;
RL   Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000081081}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000081081};
RG   Ensembl;
RL   Submitted (FEB-2012) to UniProtKB.
RN   [3] {ECO:0000313|Ensembl:ENSDARP00000081081, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000081081,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; BX323064; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; BC122279; AAI22280.1; -; mRNA.
DR   RefSeq; NP_001038816.1; NM_001045351.1.
DR   UniGene; Dr.92012; -.
DR   STRING; 7955.ENSDARP00000081081; -.
DR   Ensembl; ENSDART00000086646; ENSDARP00000081081; ENSDARG00000061049.
DR   GeneID; 751631; -.
DR   KEGG; dre:751631; -.
DR   CTD; 221687; -.
DR   ZFIN; ZDB-GENE-060825-49; rnf182.
DR   eggNOG; ENOG410ITF6; Eukaryota.
DR   eggNOG; ENOG410XT90; LUCA.
DR   GeneTree; ENSGT00730000111020; -.
DR   HOGENOM; HOG000261678; -.
DR   HOVERGEN; HBG060481; -.
DR   KO; K11983; -.
DR   OMA; CAKCLCK; -.
DR   OrthoDB; EOG091G0KUF; -.
DR   TreeFam; TF331690; -.
DR   Proteomes; UP000000437; Chromosome 2.
DR   Bgee; ENSDARG00000061049; -.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR001841; Znf_RING.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR017907; Znf_RING_CS.
DR   SMART; SM00184; RING; 1.
DR   PROSITE; PS00518; ZF_RING_1; 1.
DR   PROSITE; PS50089; ZF_RING_2; 1.
PE   2: Evidence at transcript level;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    187    208       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    215    234       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       20     68       RING-type. {ECO:0000259|PROSITE:PS50089}.
CC   --------------------------------------------------------------------------
CC   The following FT lines are automated annotations from the MyHits database.
CC   --------------------------------------------------------------------------
FT   MYHIT        39     48       ipat:ZF_RING_1 [T]
FT   MYHIT        20     68       iprf:ZF_RING_2 [T]
FT   MYHIT        20     67       ismart:RING [T]
SQ   SEQUENCE   248 AA;  27645 MW;  C6EB5E6C10988322 CRC64;
     MGQLPEEDLV GGFTTEELEC KICYCAYSLS SRRPKVLKCC HCLCAKCLAK IHDLGESSPN
     AVICPFCRYI TELPREDVDS LPDEYNLVSA LLSFQMRKSH NLQDNQGEIL LSPRRLTSLV
     GHSASASPTS IRSNYVVITI MEPRQESVIP SPGRDYRSSS LDSMASVTNR WTVWNCAALL
     CQTSARVLVW LLGLLYFSSL PLGVYLLIMQ HTTIGVLMVS LVPVSLLIVM VYGLCQCLCR
     EFWDCVPP
//