MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 526 {ECO:0000313|Ensembl:ENSRNOP00000066458}; |
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| MyHits synonyms | M0RAB3_RAT , M0RAB3 , B2BF3A9CAFB11E3E |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, ismart:ZnF_C2H2 [T]; 3, iprf:ZINC_FINGER_C2H2_2 [T]; 4, ipat:ZINC_FINGER_C2H2_1 [T].
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ID M0RAB3_RAT Unreviewed; 698 AA.
AC M0RAB3;
DT 03-APR-2013, integrated into UniProtKB/TrEMBL.
DT 22-JUL-2015, sequence version 2.
DT 10-MAY-2017, entry version 33.
DE SubName: Full=Zinc finger protein 526 {ECO:0000313|Ensembl:ENSRNOP00000066458};
GN Name=Zfp526 {ECO:0000313|Ensembl:ENSRNOP00000066458,
GN ECO:0000313|RGD:1588959};
GN Synonyms=LOC687127 {ECO:0000313|RGD:1588959};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Muridae; Murinae; Rattus.
OX NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000066458, ECO:0000313|Proteomes:UP000002494};
RN [1] {ECO:0000313|Ensembl:ENSRNOP00000066458, ECO:0000313|Proteomes:UP000002494}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000066458,
RC ECO:0000313|Proteomes:UP000002494};
RX PubMed=15057822; DOI=10.1038/nature02426;
RG Rat Genome Sequencing Project Consortium;
RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
RA Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
RA Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
RA Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
RA Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
RA Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
RA Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
RA Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
RA Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
RA D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
RA Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
RA Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
RA Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
RA Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
RA Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
RA Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
RA Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
RA Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
RA Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
RA Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
RA Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
RA Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
RA Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
RA Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
RA Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
RA Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
RA Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
RA Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
RA Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
RA Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
RA Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
RA Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
RA Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
RA Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
RA Collins F.S.;
RT "Genome sequence of the Brown Norway rat yields insights into
RT mammalian evolution.";
RL Nature 428:493-521(2004).
RN [2] {ECO:0000313|Ensembl:ENSRNOP00000066458}
RP IDENTIFICATION.
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000066458};
RG Ensembl;
RL Submitted (FEB-2013) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSRNOP00000066458}.
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DR EMBL; AABR07002706; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_006223194.1; XM_006223132.3.
DR RefSeq; XP_006228576.1; XM_006228514.3.
DR RefSeq; XP_017443633.1; XM_017588144.1.
DR RefSeq; XP_017445505.1; XM_017590016.1.
DR STRING; 10116.ENSRNOP00000066458; -.
DR PaxDb; M0RAB3; -.
DR Ensembl; ENSRNOT00000071251; ENSRNOP00000066458; ENSRNOG00000047526.
DR GeneID; 687127; -.
DR CTD; 210172; -.
DR RGD; 1588959; Zfp526.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00670000098063; -.
DR OMA; TIMCTEL; -.
DR OrthoDB; EOG091G05J3; -.
DR Proteomes; UP000002494; Chromosome 1.
DR Bgee; ENSRNOG00000047526; -.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 14.
DR SUPFAM; SSF57667; SSF57667; 8.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 12.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 11.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000002494};
KW Reference proteome {ECO:0000313|Proteomes:UP000002494}.
FT DOMAIN 87 109 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 139 166 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 335 362 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 362 389 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 390 417 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 418 444 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 470 498 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 500 527 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 528 555 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 556 578 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 601 628 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 500 522 ismart:ZnF_C2H2 [T]
FT MYHIT 390 417 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 225 245 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 337 357 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 173 194 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 139 161 ismart:ZnF_C2H2 [T]
FT MYHIT 141 161 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 87 109 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 556 578 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 171 194 ismart:ZnF_C2H2 [T]
FT MYHIT 223 245 ismart:ZnF_C2H2 [T]
FT MYHIT 470 493 ismart:ZnF_C2H2 [T]
FT MYHIT 528 550 ismart:ZnF_C2H2 [T]
FT MYHIT 87 109 ismart:ZnF_C2H2 [T]
FT MYHIT 418 444 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 392 412 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 556 578 ismart:ZnF_C2H2 [T]
FT MYHIT 601 628 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 528 555 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 335 357 ismart:ZnF_C2H2 [T]
FT MYHIT 603 623 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 362 389 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 335 362 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 418 439 ismart:ZnF_C2H2 [T]
FT MYHIT 472 493 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 558 578 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 364 384 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 303 326 ismart:ZnF_C2H2 [T]
FT MYHIT 362 384 ismart:ZnF_C2H2 [T]
FT MYHIT 502 522 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 601 623 ismart:ZnF_C2H2 [T]
FT MYHIT 390 412 ismart:ZnF_C2H2 [T]
FT MYHIT 139 166 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 530 550 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 470 498 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 89 109 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 500 527 iprf:ZINC_FINGER_C2H2_2 [T]
SQ SEQUENCE 698 AA; 76544 MW; B2BF3A9CAFB11E3E CRC64;
MGGVDSEGSH TPEAEGLCQE RQGLLGGTAC PTMAEMVAEA EMPTQSPGAV EISTAVSGEL
AEMTTAVTEM TSGEALASSL FFQHHQFMCS ECGSLYNTLE EVLSHQEQHL LTMSEEETLT
TQDTGLESEL VPSTGEGPFQ CGECSQLILS PSELLAHQDA HLQESASQIQ YQCGDCQELF
PSPELWVAHR KTQHLSSAAD EPPPPLPPPN PPPPPPEVKM EPYECPECST LCATPEEFLE
HQGTHFDSLE KEERNGLEEE GEDEEEEGEE EEDDDEETDE EETSTELTAD DTEGDRSTAD
PARSCGDCPQ HCTSSGARRK HRRASHGPAS ATHPFHCSQC QRSFSSANRL VAHGRAHVGG
TYECTTCSKV FKKAASLEQH QRLHRGEARY LCVDCGRGFG TELTLVAHRR AHTANPLHRC
RCGKTFSNMT KFLYHRRTHT GKSGTPTKVA TVSPAPAEPT PMPPPPPAQL PCPQCPKSFA
SASRLSRHRR AVHGPPERRH RCGVCGKGFK KLVHVRNHLR THTGERPFQC HSCGKTFASL
ANLSRHQLTH TGVRPYQCLD CGKRFTQSSN LQQHRRLHLR PVAFARAPRL PITGLYNKSP
YYCGTCGRWF RAMAGLRLHQ RVHARARSLT LQPPRSPSPV PPPAPEPQQT IMCTELGETI
AIIETSQPLA LEDTLQLCQA ALGASEASGL LQLDTAFV
//
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