MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 1075 {ECO:0000313|Ensembl:ENSDARP00000130525}; |
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| MyHits synonyms | K7DY25_DANRE , K7DY25 , 05ACBF20D170230F |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, ipat:ZINC_FINGER_C2H2_1 [T]; 3, ismart:ZnF_C2H2 [T]; 4, iprf:ZINC_FINGER_C2H2_2 [T].
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ID K7DY25_DANRE Unreviewed; 361 AA.
AC K7DY25;
DT 09-JAN-2013, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2013, sequence version 1.
DT 10-MAY-2017, entry version 34.
DE SubName: Full=Zinc finger protein 1075 {ECO:0000313|Ensembl:ENSDARP00000130525};
GN Name=znf1075 {ECO:0000313|Ensembl:ENSDARP00000130525,
GN ECO:0000313|ZFIN:ZDB-GENE-120703-31};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000130525, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000130525, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000130525,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000130525}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000130525};
RG Ensembl;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000130525}.
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DR EMBL; BX465195; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CR759907; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR Ensembl; ENSDART00000168009; ENSDARP00000130525; ENSDARG00000099403.
DR ZFIN; ZDB-GENE-120703-31; znf1075.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00870000136801; -.
DR Proteomes; UP000000437; Chromosome 4.
DR Bgee; ENSDARG00000092879; -.
DR ExpressionAtlas; K7DY25; baseline.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 10.
DR SUPFAM; SSF57667; SSF57667; 6.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 10.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 10.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 80 107 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 108 135 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 136 163 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 164 191 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 192 219 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 220 247 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 248 275 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 276 300 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 304 331 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 331 358 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
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CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 82 102 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 164 186 ismart:ZnF_C2H2 [T]
FT MYHIT 108 135 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 333 353 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 80 102 ismart:ZnF_C2H2 [T]
FT MYHIT 306 326 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 276 298 ismart:ZnF_C2H2 [T]
FT MYHIT 194 214 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 80 107 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 304 331 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 331 358 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 108 130 ismart:ZnF_C2H2 [T]
FT MYHIT 304 326 ismart:ZnF_C2H2 [T]
FT MYHIT 248 275 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 138 158 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 110 130 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 220 247 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 164 191 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 250 270 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 136 163 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 136 158 ismart:ZnF_C2H2 [T]
FT MYHIT 192 219 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 278 298 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 192 214 ismart:ZnF_C2H2 [T]
FT MYHIT 276 300 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 220 242 ismart:ZnF_C2H2 [T]
FT MYHIT 331 353 ismart:ZnF_C2H2 [T]
FT MYHIT 248 270 ismart:ZnF_C2H2 [T]
FT MYHIT 222 242 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 166 186 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 361 AA; 41421 MW; 05ACBF20D170230F CRC64;
MALIKEESED VKIEETFTVK QEDLQEQTDL MVLKEETQWN KTEEKHFEKH QETTTDEKPT
LTEKTSSCGG PRKSKSACNF TCLQCGNCFT RKHNLQVHMR VHTGEKPYSC PQCGKSFKQN
GYLKVHMRTH TGERCYTCQQ CGQRFYTTGN FAQHMRIHTG GRLYTCLQCG KSLYQSANLA
AHMRIHTVEK PYSCIQCGKS FKQNSSLEAH IRAHNDGRIF TCPQCGKSFA QKKDLEIHML
IHTGEKPYTC TECGKSFRFK STLKQHMISH TREKPFTCAQ CGRSFTTKSS LLNHMNVHTG
TIVFTCDQCG KTLTRKDSIK NHMKTHSVER FRCSECGKGF KSKRSLNTHM KLHNGEQSSQ
N
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