ID ILI7_ORYSJ Reviewed; 91 AA.
AC Q338G6; A0A0P0XUE9;
DT 14-MAY-2014, integrated into UniProtKB/Swiss-Prot.
DT 06-DEC-2005, sequence version 1.
DT 10-MAY-2017, entry version 61.
DE RecName: Full=Transcription factor ILI7;
DE Short=OsILI7;
DE AltName: Full=Basic helix-loop-helix protein 173;
DE Short=OsbHLH173;
DE AltName: Full=Protein INCREASED LEAF INCLINATION 7;
DE AltName: Full=bHLH transcription factor bHLH173;
GN Name=ILI7; Synonyms=BHLH173;
GN OrderedLocusNames=LOC_Os10g26460, Os10g0404300;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12791992; DOI=10.1126/science.1083523;
RA Yu Y., Rambo T., Currie J., Saski C., Kim H.-R., Collura K.,
RA Thompson S., Simmons J., Yang T.-J., Nah G., Patel A.J., Thurmond S.,
RA Henry D., Oates R., Palmer M., Pries G., Gibson J., Anderson H.,
RA Paradkar M., Crane L., Dale J., Carver M.B., Wood T., Frisch D.,
RA Engler F., Soderlund C., Palmer L.E., Teytelman L., Nascimento L.,
RA De la Bastide M., Spiegel L., Ware D., O'Shaughnessy A., Dike S.,
RA Dedhia N., Preston R., Huang E., Ferraro K., Kuit K., Miller B.,
RA Zutavern T., Katzenberger F., Muller S., Balija V., Martienssen R.A.,
RA Stein L., Minx P., Johnson D., Cordum H., Mardis E., Cheng Z.,
RA Jiang J., Wilson R., McCombie W.R., Wing R.A., Yuan Q., Ouyang S.,
RA Liu J., Jones K.M., Gansberger K., Moffat K., Hill J., Tsitrin T.,
RA Overton L., Bera J., Kim M., Jin S., Tallon L., Ciecko A., Pai G.,
RA Van Aken S., Utterback T., Reidmuller S., Bormann J., Feldblyum T.,
RA Hsiao J., Zismann V., Blunt S., de Vazeille A.R., Shaffer T., Koo H.,
RA Suh B., Yang Q., Haas B., Peterson J., Pertea M., Volfovsky N.,
RA Wortman J., White O., Salzberg S.L., Fraser C.M., Buell C.R.,
RA Messing J., Song R., Fuks G., Llaca V., Kovchak S., Young S.,
RA Bowers J.E., Paterson A.H., Johns M.A., Mao L., Pan H., Dean R.A.;
RT "In-depth view of structure, activity, and evolution of rice
RT chromosome 10.";
RL Science 300:1566-1569(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H.,
RA McCombie W.R., Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S.,
RA Childs K.L., Davidson R.M., Lin H., Quesada-Ocampo L.,
RA Vaillancourt B., Sakai H., Lee S.S., Kim J., Numa H., Itoh T.,
RA Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using
RT next generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=20472752; DOI=10.1104/pp.110.153593;
RA Carretero-Paulet L., Galstyan A., Roig-Villanova I.,
RA Martinez-Garcia J.F., Bilbao-Castro J.R., Robertson D.L.;
RT "Genome-wide classification and evolutionary analysis of the bHLH
RT family of transcription factors in Arabidopsis, poplar, rice, moss,
RT and algae.";
RL Plant Physiol. 153:1398-1412(2010).
CC -!- FUNCTION: Atypical and probable non DNA-binding bHLH transcription
CC factor that integrates multiple signaling pathways to regulate
CC cell elongation and plant development. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the bHLH protein family.
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DR EMBL; DP000086; ABB47567.1; -; Genomic_DNA.
DR EMBL; AP008216; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AP014966; BAT10759.1; -; Genomic_DNA.
DR RefSeq; XP_015614007.1; XM_015758521.1.
DR STRING; 39947.LOC_Os10g26460.1; -.
DR PaxDb; Q338G6; -.
DR EnsemblPlants; OS10T0404300-00; OS10T0404300-00; OS10G0404300.
DR GeneID; 107277392; -.
DR Gramene; OS10T0404300-00; OS10T0404300-00; OS10G0404300.
DR KEGG; osa:107277392; -.
DR eggNOG; ENOG410JFA5; Eukaryota.
DR eggNOG; ENOG4111AN3; LUCA.
DR OrthoDB; EOG093610S7; -.
DR Proteomes; UP000059680; Chromosome 10.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
DR Gene3D; 4.10.280.10; -; 1.
DR InterPro; IPR011598; bHLH_dom.
DR SUPFAM; SSF47459; SSF47459; 1.
DR PROSITE; PS50888; BHLH; 1.
PE 3: Inferred from homology;
KW Complete proteome; Growth regulation; Reference proteome;
KW Transcription; Transcription regulation.
FT CHAIN 1 91 Transcription factor ILI7.
FT /FTId=PRO_0000429100.
FT DOMAIN 4 58 bHLH. {ECO:0000255|PROSITE-
FT ProRule:PRU00981}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 4 58 iprf:BHLH [T]
SQ SEQUENCE 91 AA; 10033 MW; F2AD7B0B51B18801 CRC64;
MSRRSRSRAS SAARITDEQI GDLVSKLQAL LPEARLRSND RVPSARVLQE TCSYIRSLHR
EVDDLSERLA ELLAAADVST AQAAVIRGLL M
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