MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | RecName: Full=Vesicle transport protein GOT1B; AltName: Full=Golgi transport 1 homolog B; |
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| MyHits synonyms | GOT1B_BOVIN , Q2YDE3 , 2EB85823C34EFAFA |
 Legends: 1, TOPO_DOM Lumenal. {ECO:0000255}; 2, N-acetylmethionine. {ECO:0000250|UniProtKB:Q9Y3E0}; 3, TOPO_DOM Cytoplasmic. {ECO:0000255}; 4, TRANSMEM Helical; Name=1. {ECO:0000255}; 5, TRANSMEM Helical; Name=2. {ECO:0000255}; 6, TRANSMEM Helical; Name=3. {ECO:0000255}; 7, TRANSMEM Helical; Name=4. {ECO:0000255}.
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ID GOT1B_BOVIN Reviewed; 138 AA.
AC Q2YDE3;
DT 30-MAY-2006, integrated into UniProtKB/Swiss-Prot.
DT 20-DEC-2005, sequence version 1.
DT 15-MAR-2017, entry version 71.
DE RecName: Full=Vesicle transport protein GOT1B;
DE AltName: Full=Golgi transport 1 homolog B;
GN Name=GOLT1B {ECO:0000250|UniProtKB:Q9Y3E0};
OS Bos taurus (Bovine).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia;
OC Pecora; Bovidae; Bovinae; Bos.
OX NCBI_TaxID=9913;
RN [1] {ECO:0000312|EMBL:AAI10262.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=Crossbred X Angus {ECO:0000312|EMBL:AAI10262.1};
RC TISSUE=Liver {ECO:0000312|EMBL:AAI10262.1};
RG NIH - Mammalian Gene Collection (MGC) project;
RL Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May be involved in fusion of ER-derived transport
CC vesicles with the Golgi complex. {ECO:0000250|UniProtKB:Q9Y3E0}.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000250};
CC Multi-pass membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the GOT1 family. {ECO:0000255}.
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DR EMBL; BC110261; AAI10262.1; -; mRNA.
DR RefSeq; NP_001039680.1; NM_001046215.2.
DR UniGene; Bt.74477; -.
DR ProteinModelPortal; Q2YDE3; -.
DR STRING; 9913.ENSBTAP00000000490; -.
DR PaxDb; Q2YDE3; -.
DR PRIDE; Q2YDE3; -.
DR Ensembl; ENSBTAT00000000490; ENSBTAP00000000490; ENSBTAG00000000379.
DR GeneID; 515866; -.
DR KEGG; bta:515866; -.
DR CTD; 51026; -.
DR eggNOG; KOG1743; Eukaryota.
DR eggNOG; COG5120; LUCA.
DR GeneTree; ENSGT00390000014507; -.
DR HOGENOM; HOG000035939; -.
DR HOVERGEN; HBG009362; -.
DR InParanoid; Q2YDE3; -.
DR OMA; AGESNNM; -.
DR OrthoDB; EOG091G10MS; -.
DR TreeFam; TF300267; -.
DR Proteomes; UP000009136; Chromosome 5.
DR Bgee; ENSBTAG00000000379; -.
DR GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
DR GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0004871; F:signal transducer activity; IEA:Ensembl.
DR GO; GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB signaling; IEA:Ensembl.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR InterPro; IPR007305; Vesicle_transpt_Got1/SFT2.
DR Pfam; PF04178; Got1; 1.
PE 2: Evidence at transcript level;
KW Acetylation; Complete proteome; Golgi apparatus; Membrane;
KW Protein transport; Reference proteome; Transmembrane;
KW Transmembrane helix; Transport.
FT CHAIN 1 138 Vesicle transport protein GOT1B.
FT /FTId=PRO_0000237609.
FT TOPO_DOM 1 9 Cytoplasmic. {ECO:0000255}.
FT TRANSMEM 10 30 Helical; Name=1. {ECO:0000255}.
FT TOPO_DOM 31 32 Lumenal. {ECO:0000255}.
FT TRANSMEM 33 53 Helical; Name=2. {ECO:0000255}.
FT TOPO_DOM 54 68 Cytoplasmic. {ECO:0000255}.
FT TRANSMEM 69 89 Helical; Name=3. {ECO:0000255}.
FT TOPO_DOM 90 90 Lumenal. {ECO:0000255}.
FT TRANSMEM 91 109 Helical; Name=4. {ECO:0000255}.
FT TOPO_DOM 110 138 Cytoplasmic. {ECO:0000255}.
FT COMPBIAS 17 108 Phe-rich. {ECO:0000255}.
FT MOD_RES 1 1 N-acetylmethionine.
FT {ECO:0000250|UniProtKB:Q9Y3E0}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 17 113 ipfam:Got1 [T]
SQ SEQUENCE 138 AA; 15426 MW; 2EB85823C34EFAFA CRC64;
MISLTDTQKI GMGLTGFGVF FLFFGMILFF DKALLAIGNV LFVAGLAFVI GLERTFRFFF
QKHKMKATGF FLGGVFVVLI GWPLIGMIFE IYGFFLLFRG FFPVVVGFIR RVPVLGSLLN
LPGIRSFVDK VGESNNMV
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