MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=MCG133876, isoform CRA_a {ECO:0000313|EMBL:EDL00334.1}; SubName: Full=Zinc finger protein 142 {ECO:0000313|Ensembl:ENSMUSP00000027315}; |
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| MyHits synonyms | G5E869_MOUSE , G5E869 , 3A35EF70A8E226B6 |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, iprf:ZINC_FINGER_C2H2_2 [T]; 3, ismart:ZnF_C2H2 [T]; 4, ipat:ZINC_FINGER_C2H2_1 [T].
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ID G5E869_MOUSE Unreviewed; 1843 AA.
AC G5E869;
DT 14-DEC-2011, integrated into UniProtKB/TrEMBL.
DT 14-DEC-2011, sequence version 1.
DT 10-MAY-2017, entry version 41.
DE SubName: Full=MCG133876, isoform CRA_a {ECO:0000313|EMBL:EDL00334.1};
DE SubName: Full=Zinc finger protein 142 {ECO:0000313|Ensembl:ENSMUSP00000027315};
GN Name=Zfp142 {ECO:0000313|Ensembl:ENSMUSP00000027315,
GN ECO:0000313|MGI:MGI:1924514};
GN ORFNames=mCG_133876 {ECO:0000313|EMBL:EDL00334.1};
OS Mus musculus (Mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Muridae; Murinae; Mus; Mus.
OX NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000027315, ECO:0000313|Proteomes:UP000000589};
RN [1] {ECO:0000313|EMBL:EDL00334.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Mixed {ECO:0000313|EMBL:EDL00334.1};
RX PubMed=12040188; DOI=10.1126/science.1069193;
RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R.,
RA Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A.,
RA Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.,
RA Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K.,
RA Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J.,
RA Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R.,
RA Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H.,
RA Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A.,
RA Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A.,
RA Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C.,
RA Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C.,
RA Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B.,
RA Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E.,
RA Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R.,
RA Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C.,
RA Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L.,
RA Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S.,
RA Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L.,
RA Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R.,
RA Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R.,
RA Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J.,
RA Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L.,
RA Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C.,
RA Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A.,
RA Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H.,
RA Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L.,
RA Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M.,
RA Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K.,
RA Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S.,
RA Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J.,
RA Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G.,
RA Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.;
RT "A comparison of whole-genome shotgun-derived mouse chromosome 16 and
RT the human genome.";
RL Science 296:1661-1671(2002).
RN [2] {ECO:0000313|EMBL:EDL00334.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Mixed {ECO:0000313|EMBL:EDL00334.1};
RA Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Ensembl:ENSMUSP00000027315, ECO:0000313|Proteomes:UP000000589}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000027315,
RC ECO:0000313|Proteomes:UP000000589};
RX PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
RA Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
RA She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
RA Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
RA Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
RA Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
RA Lindblad-Toh K., Eichler E.E., Ponting C.P.;
RT "Lineage-specific biology revealed by a finished genome assembly of
RT the mouse.";
RL PLoS Biol. 7:E1000112-E1000112(2009).
RN [4] {ECO:0000313|Ensembl:ENSMUSP00000027315}
RP IDENTIFICATION.
RC STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000027315};
RG Ensembl;
RL Submitted (OCT-2011) to UniProtKB.
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DR EMBL; AC117610; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH466548; EDL00334.1; -; Genomic_DNA.
DR RefSeq; NP_001297597.1; NM_001310668.1.
DR RefSeq; XP_006496381.1; XM_006496318.2.
DR RefSeq; XP_006496382.1; XM_006496319.2.
DR UniGene; Mm.207298; -.
DR STRING; 10090.ENSMUSP00000109366; -.
DR Ensembl; ENSMUST00000027315; ENSMUSP00000027315; ENSMUSG00000026135.
DR GeneID; 77264; -.
DR KEGG; mmu:77264; -.
DR UCSC; uc007bmn.1; mouse.
DR CTD; 77264; -.
DR MGI; MGI:1924514; Zfp142.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00850000132342; -.
DR OMA; CPFSCQQ; -.
DR OrthoDB; EOG091G008L; -.
DR ChiTaRS; Zfp142; mouse.
DR Proteomes; UP000000589; Chromosome 1.
DR Bgee; ENSMUSG00000026135; -.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 4.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 41.
DR SUPFAM; SSF57667; SSF57667; 13.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 18.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 21.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000589};
KW Reference proteome {ECO:0000313|Proteomes:UP000000589}.
FT DOMAIN 103 127 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 164 186 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 363 390 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 391 418 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 453 480 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 543 571 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 601 628 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 629 656 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 657 684 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 685 712 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 744 772 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1331 1359 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1388 1416 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1446 1474 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1514 1542 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1608 1635 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1636 1663 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1664 1691 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1692 1720 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1721 1748 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 1749 1776 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 103 127 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 164 186 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1187 1207 ismart:ZnF_C2H2 [T]
FT MYHIT 365 385 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1608 1635 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1777 1799 ismart:ZnF_C2H2 [T]
FT MYHIT 1388 1416 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 223 247 ismart:ZnF_C2H2 [T]
FT MYHIT 1516 1537 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1638 1658 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 363 385 ismart:ZnF_C2H2 [T]
FT MYHIT 1417 1440 ismart:ZnF_C2H2 [T]
FT MYHIT 543 571 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 744 767 ismart:ZnF_C2H2 [T]
FT MYHIT 105 127 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1721 1748 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1360 1382 ismart:ZnF_C2H2 [T]
FT MYHIT 1448 1469 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1446 1474 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1540 1563 ismart:ZnF_C2H2 [T]
FT MYHIT 744 772 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 453 475 ismart:ZnF_C2H2 [T]
FT MYHIT 687 707 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 250 272 ismart:ZnF_C2H2 [T]
FT MYHIT 657 684 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1664 1691 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 545 566 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1749 1776 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1581 1602 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1692 1720 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 103 127 ismart:ZnF_C2H2 [T]
FT MYHIT 629 651 ismart:ZnF_C2H2 [T]
FT MYHIT 1388 1411 ismart:ZnF_C2H2 [T]
FT MYHIT 1723 1743 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 631 651 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1331 1354 ismart:ZnF_C2H2 [T]
FT MYHIT 516 540 ismart:ZnF_C2H2 [T]
FT MYHIT 1265 1285 ismart:ZnF_C2H2 [T]
FT MYHIT 1749 1771 ismart:ZnF_C2H2 [T]
FT MYHIT 572 595 ismart:ZnF_C2H2 [T]
FT MYHIT 1333 1354 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 193 218 ismart:ZnF_C2H2 [T]
FT MYHIT 391 411 ismart:ZnF_C2H2 [T]
FT MYHIT 685 712 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1069 1089 ismart:ZnF_C2H2 [T]
FT MYHIT 166 186 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 486 511 ismart:ZnF_C2H2 [T]
FT MYHIT 1608 1630 ismart:ZnF_C2H2 [T]
FT MYHIT 453 480 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1446 1469 ismart:ZnF_C2H2 [T]
FT MYHIT 455 475 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1488 1511 ismart:ZnF_C2H2 [T]
FT MYHIT 1751 1771 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 419 442 ismart:ZnF_C2H2 [T]
FT MYHIT 601 623 ismart:ZnF_C2H2 [T]
FT MYHIT 629 656 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 714 736 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 543 566 ismart:ZnF_C2H2 [T]
FT MYHIT 1580 1602 ismart:ZnF_C2H2 [T]
FT MYHIT 685 707 ismart:ZnF_C2H2 [T]
FT MYHIT 1390 1411 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1666 1686 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1331 1359 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 164 186 ismart:ZnF_C2H2 [T]
FT MYHIT 773 796 ismart:ZnF_C2H2 [T]
FT MYHIT 1295 1318 ismart:ZnF_C2H2 [T]
FT MYHIT 657 679 ismart:ZnF_C2H2 [T]
FT MYHIT 391 418 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1514 1542 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 601 628 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1636 1663 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 1039 1059 ismart:ZnF_C2H2 [T]
FT MYHIT 1721 1743 ismart:ZnF_C2H2 [T]
FT MYHIT 1692 1715 ismart:ZnF_C2H2 [T]
FT MYHIT 1514 1536 ismart:ZnF_C2H2 [T]
FT MYHIT 518 540 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 1636 1658 ismart:ZnF_C2H2 [T]
FT MYHIT 1664 1686 ismart:ZnF_C2H2 [T]
FT MYHIT 363 390 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 712 735 ismart:ZnF_C2H2 [T]
SQ SEQUENCE 1843 AA; 206230 MW; 3A35EF70A8E226B6 CRC64;
MTDPVLASQL ANGTGEMDGL CSELLLIPPP LSNHGILGPV QNTCASGELA PLPADPGCLL
VEATATEEGP GNMEIIVEAV TGTLSPGAPE ETSGVLVKVV EVYFCERCEQ SFAEPTLLSV
HQCTETHIQA VQDLSSPPCS VELPPSNLAL RGPLQDPSLP DSPLPCPVCR QEFVQPQALK
SHFKIHRVTP NMFSCPESGC VFSAEDRKGL QNHLRQTHKA VPVPCSFRGC SLLFGSQQGM
ELHRQAHYPF HCSHCSFMGS NVKLFRQHQR SHGASARGEL SAAVQGLPSQ ELLPAAKLPP
GHREPSEEAS TPLPGQESAE EEDAEEEESV TQKDSQKVMD KSQGAQQLEG HVGSGTESLF
KTHMCPECKR CFKKRTHLVE HLHLHFPDPS LQCPNCQKFF TSKSKLKTHL LRELGEKAHR
CPLCHYSAVE RNALNRHMAS MHEDISNFYS DTYACPVCRE EFRLSQALKE HLKSHTAAAA
AEPLPLHCFQ EGCTYVAPDR KAFLKHLKEI HGVRAVECRH HSCPMLFATA EAMEAHHKSH
YAFHCPHCDF ACSNKHLFRK HKKQGHPGSE ELRCTFCPFA TFNPVAYQDH VGKMHAYEKI
HQCSECNFAT AHKRVLIRHM LLHTGEKPHK CELCDFTCRD VSYLSKHMLT HSNTKDYMCT
ECGYVTKWKH YLSVHMRKHA GDLRYQCNQC SYRCHRADQL SSHKLRHQGK SLMCEVCAFA
CKRKYELQKH MASQHHPGTP APLYPCRYCS YQSRHKQALL SHENCKHTHL REFHCALCDY
RTFSNTTLFF HKRKVHGYMP GDQVWQFCNA SQELEGARQC LAPPSDSGPS SQLSAQPERE
DREHEIVANS NMDQALPETN EEASPKRQDG IEAPQEDDQV DSPSLGEVEE GGCTLHLEAL
RVELEPETEP LPLEELTETA TVEFRPLDPS GPLGTERPGG LEEPALSSFD SIETPALVAE
EEPVVEKLAS EPPRNPLISE EAPNTFKAAL TAETVPLPPF PESESLLKAM RRQDKEQAEA
LVLEGRVQMV VIQGEGRAFR CPHCPFITRR EKALTLHSKS GCQGRREPLL CPECGASFKQ
QRGLSTHMMK KCPVLLKKNK ALPKPVSPTL HPQLPDNQAS QDAESRKPPP LPSKVELLLP
KDAPSDLPGG PGVEEPLPTP SDFPTSPPEN SLPTGTSEKF HFEQGKFHCS SCTFLCSRLS
SITSHVTEGC RGGRGQKRKR GRPQTHAVVL PLNNGDSTLL NTGSTESSPS DGDTAVVQKQ
KGALFSCPTC PFSCQQERTL RTHQTQGCPL KSGDLHCGLC PFTAPAAAAL RLHQKRRHPT
ASPASGPRPL LQCGDCGFTC KQSRCLQQHR RLKHEGVKPH QCPFCDFSTT RRYRLEAHQS
RHTGVGRIPC SSCPQTFGTN SKLRLHQLRV HDKTPTHFCP LCDYSGYLRH DITRHVNSCH
QGTPSFSCTQ CEAQFSSETA LKQHALRRHP EPTPPSSGCP VEVTEGPLHC SHCGLLCPSP
ASLRGHTRKQ HPRLECGACQ ESFPNRPALD EHRRQHHFSH RCQLCSFAAR ERVGLVKHYL
EQHEESSTAP SDGDAGQPSL CCPFCDFACR HQLVLDHHVK GHGGTRLYKC TDCAYSTKNR
QKITWHSRIH TGEKPYHCHL CAYACADPSR LKYHMRIHKE ERKYLCPECG YKCKWVNQLK
YHMTKHTGLK PYQCPECEYC TNRADALRVH RETRHREARA FMCEQCGKAF KTRFLLRTHL
RKHSEAKPYV CNVCHRAFRW AAGLRHHALT HTDRHPFFCR LCSYKAKQKF QVVKHVRRHH
PDQADPNQGV GKDPTTPTVH LHDVKLEDPS PPAPPAPSTG PEG
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