MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 623 {ECO:0000313|EMBL:EGW13772.1}; |
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| MyHits synonyms | G3IKW5_CRIGR , G3IKW5 , 96004B3CCB6DF5C3 |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, iprf:ZINC_FINGER_C2H2_2 [T]; 3, ismart:ZnF_C2H2 [T]; 4, ipat:ZINC_FINGER_C2H2_1 [T].
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ID G3IKW5_CRIGR Unreviewed; 713 AA.
AC G3IKW5;
DT 16-NOV-2011, integrated into UniProtKB/TrEMBL.
DT 16-NOV-2011, sequence version 1.
DT 10-MAY-2017, entry version 22.
DE SubName: Full=Zinc finger protein 623 {ECO:0000313|EMBL:EGW13772.1};
GN ORFNames=I79_024519 {ECO:0000313|EMBL:EGW13772.1};
OS Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Cricetidae; Cricetinae; Cricetulus.
OX NCBI_TaxID=10029 {ECO:0000313|EMBL:EGW13772.1, ECO:0000313|Proteomes:UP000001075};
RN [1] {ECO:0000313|Proteomes:UP000001075}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CHO K1 cell line {ECO:0000313|Proteomes:UP000001075};
RX PubMed=21804562; DOI=10.1038/nbt.1932;
RA Xu X., Nagarajan H., Lewis N.E., Pan S., Cai Z., Liu X., Chen W.,
RA Xie M., Wang W., Hammond S., Andersen M.R., Neff N., Passarelli B.,
RA Koh W., Fan H.C., Wang J., Gui Y., Lee K.H., Betenbaugh M.J.,
RA Quake S.R., Famili I., Palsson B.O., Wang J.;
RT "The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell
RT line.";
RL Nat. Biotechnol. 29:735-741(2011).
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DR EMBL; JH003794; EGW13772.1; -; Genomic_DNA.
DR ProteinModelPortal; G3IKW5; -.
DR InParanoid; G3IKW5; -.
DR Proteomes; UP000001075; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 19.
DR SUPFAM; SSF57667; SSF57667; 11.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 19.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 20.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000001075};
KW Reference proteome {ECO:0000313|Proteomes:UP000001075}.
FT DOMAIN 43 70 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 71 98 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 99 126 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 127 154 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 155 182 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 183 210 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 211 238 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 239 266 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 267 294 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 295 322 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 323 350 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 351 378 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 379 406 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 518 545 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 546 573 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 574 601 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 602 629 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 630 657 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 658 685 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 686 708 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
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CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 155 182 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 71 93 ismart:ZnF_C2H2 [T]
FT MYHIT 323 345 ismart:ZnF_C2H2 [T]
FT MYHIT 295 322 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 688 708 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 351 378 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 602 624 ismart:ZnF_C2H2 [T]
FT MYHIT 546 573 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 101 121 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 73 93 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 71 98 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 211 238 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 325 345 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 660 680 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 183 210 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 658 685 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 351 373 ismart:ZnF_C2H2 [T]
FT MYHIT 155 177 ismart:ZnF_C2H2 [T]
FT MYHIT 295 317 ismart:ZnF_C2H2 [T]
FT MYHIT 183 205 ismart:ZnF_C2H2 [T]
FT MYHIT 241 261 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 546 568 ismart:ZnF_C2H2 [T]
FT MYHIT 323 350 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 574 596 ismart:ZnF_C2H2 [T]
FT MYHIT 99 126 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 686 708 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 548 568 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 630 652 ismart:ZnF_C2H2 [T]
FT MYHIT 185 205 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 602 629 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 267 294 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 632 652 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 127 149 ismart:ZnF_C2H2 [T]
FT MYHIT 43 70 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 269 289 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 604 624 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 239 261 ismart:ZnF_C2H2 [T]
FT MYHIT 127 154 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 686 708 ismart:ZnF_C2H2 [T]
FT MYHIT 239 266 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 518 545 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 297 317 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 353 373 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 129 149 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 379 401 ismart:ZnF_C2H2 [T]
FT MYHIT 157 177 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 213 233 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 575 596 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 574 601 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 99 121 ismart:ZnF_C2H2 [T]
FT MYHIT 379 406 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 658 680 ismart:ZnF_C2H2 [T]
FT MYHIT 630 657 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 211 233 ismart:ZnF_C2H2 [T]
FT MYHIT 520 540 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 518 540 ismart:ZnF_C2H2 [T]
FT MYHIT 381 401 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 267 289 ismart:ZnF_C2H2 [T]
SQ SEQUENCE 713 AA; 82315 MW; 96004B3CCB6DF5C3 CRC64;
MTVTRWKIQT GETAQMCSKS GRNPTLNSNL LILQRELIEG ETHSCGIGSK SFSFNSNVVP
HQISHTGEKP YQCDRCGKAF SQNSLLTEHQ RVHTGDRLYV CNVCGKDFIH YTNLVEHQHV
HTDEKPFKCA QCGKAFCHSS DLLRHQRVHT RERPFECKEC GKGFSQSSLL IRHQRIHTGE
RPYECNECGK SFIRSSSLIR HYQIHTEVKQ YECRDCGKAF RHRSDLIEHQ RIHTGERPFE
CHECGKAFIR SSKLIQHQRI HTGERPYVCN ECGKRFSQTS NFTQHQRIHT GEKLYECDEC
GKAFFLSSYL IRHQKIHTGE RVYECKECGK AFLQKAHLTE HQKIHTGDRP FECKDCGKAF
IQSSKLLLHQ IVHTGEKPYV CSYCGKGFIQ RSNFLQHQKV HTEEKLYKYS QHGKDLTPPP
DLVHQEDLSL RGRKSVDQKR PCDLASAHER AHPRMGAKRG ATMRKSVLTA GKVHLPRDTS
GKKVDKQKAF QDQLCGKSYR KQLGLKEQCK SGAEGHPFIC GTCGKALSCH SRLAAHQTVH
TGTRSFECFE CGQTFRWVSN LLRHQRNHTS EKPFCCEVCG QAFSLKDRLA QHRKIHTEHR
PYVCSDCGKA FKQKSNLLRH KLVHTGERPF YCDNCGKAFR TKENLSHHQR IHSGEKPYTC
GQCGKAFRWP KGFSIHQRLH LTKRFYECEH CGKGFRHLGF FTRHQRTHGR GEV
//
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