Entry euk:F8W5G6_DANRE

ID   F8W5G6_DANRE            Unreviewed;       312 AA.
AC   F8W5G6;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   15-MAR-2017, entry version 9.
DE   SubName: Full=Zgc:100911 {ECO:0000313|Ensembl:ENSDARP00000125103};
DE   Flags: Fragment;
GN   ORFNames=zgc:100911 {ECO:0000313|Ensembl:ENSDARP00000125103,
GN   ECO:0000313|ZFIN:ZDB-GENE-040801-162};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000125103, ECO:0000313|Proteomes:UP000000437};
RN   [1] {ECO:0000313|Ensembl:ENSDARP00000125103}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000125103};
RG   Ensembl;
RL   Submitted (FEB-2012) to UniProtKB.
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000125103, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000125103,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSDARP00000125103}.
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DR   EMBL; CU905501; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   STRING; 7955.ENSDARP00000125103; -.
DR   Ensembl; ENSDART00000149464; ENSDARP00000125103; ENSDARG00000036897.
DR   ZFIN; ZDB-GENE-040801-162; zgc:100911.
DR   eggNOG; KOG3058; Eukaryota.
DR   eggNOG; ENOG410XNSC; LUCA.
DR   GeneTree; ENSGT00390000001630; -.
DR   TreeFam; TF314547; -.
DR   Reactome; R-DRE-1660661; Sphingolipid de novo biosynthesis.
DR   Proteomes; UP000000437; Chromosome 23.
DR   ExpressionAtlas; F8W5G6; baseline.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR025749; Sphingomyelin_synth-like_dom.
DR   Pfam; PF14360; PAP2_C; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     92    112       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    138    159       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    171    189       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    236    255       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    262    283       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      232    307       PAP2_C. {ECO:0000259|Pfam:PF14360}.
FT   NON_TER     312    312       {ECO:0000313|Ensembl:ENSDARP00000125103}.
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CC   The following FT lines are automated annotations from the MyHits database.
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FT   MYHIT       232    307       ipfam:PAP2_C [T]
SQ   SEQUENCE   312 AA;  36474 MW;  FE0F22ADCD984654 CRC64;
     MAQTQLLDEQ DDGQISEYHV MVTVEDSTRP QTPPTGRTHP YQDTPPFSQV DDKPKDSKQR
     GFRRIRKNQD YVHITMAKSS TSRLPSEWWK TGIAFIWACF NLVLTTAMIT IVHDRVPDKS
     VSPPLPDKFF DYVPRKEWAF RVTEVFGMIL VVLWFIQWLS LKYRAIVGRR FFFLQGLLYM
     YRMVTMYITT LPVPSMHMEC APKLQNNSYE KLQRAYQLVT GAGLSITGSH RMCGDFLYSG
     HTVMLTLTFL FIYEYSPRSR LWTVYHVICG LLSAMGMICI LMGHEHYSLD VVVAYYITSR
     LFYWYHTMAN NQ
//