Entry euk:F8W4R7_DANRE

ID   F8W4R7_DANRE            Unreviewed;       186 AA.
AC   F8W4R7;
DT   21-SEP-2011, integrated into UniProtKB/TrEMBL.
DT   21-SEP-2011, sequence version 1.
DT   15-MAR-2017, entry version 36.
DE   SubName: Full=Zgc:101853 {ECO:0000313|Ensembl:ENSDARP00000124161};
DE   Flags: Fragment;
GN   ORFNames=zgc:101853 {ECO:0000313|Ensembl:ENSDARP00000124161,
GN   ECO:0000313|ZFIN:ZDB-GENE-041212-13};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000124161, ECO:0000313|Proteomes:UP000000437};
RN   [1] {ECO:0000313|Ensembl:ENSDARP00000124161}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000124161};
RG   Ensembl;
RL   Submitted (JUL-2011) to UniProtKB.
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000124161, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000124161,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSDARP00000124161}.
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DR   EMBL; CABZ01076995; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CABZ01076996; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CU905501; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   STRING; 7955.ENSDARP00000124114; -.
DR   PaxDb; F8W4R7; -.
DR   Ensembl; ENSDART00000149462; ENSDARP00000124161; ENSDARG00000036894.
DR   ZFIN; ZDB-GENE-041212-13; zgc:101853.
DR   eggNOG; KOG2241; Eukaryota.
DR   eggNOG; COG0073; LUCA.
DR   GeneTree; ENSGT00790000123080; -.
DR   Proteomes; UP000000437; Chromosome 23.
DR   Bgee; ENSDARG00000036894; -.
DR   ExpressionAtlas; F8W4R7; baseline.
DR   GO; GO:0000049; F:tRNA binding; IEA:InterPro.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR002547; tRNA-bd_dom.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   PROSITE; PS50886; TRBD; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT   DOMAIN      141    186       TRNA-binding.
FT                                {ECO:0000259|PROSITE:PS50886}.
FT   COILED       44     78       {ECO:0000256|SAM:Coils}.
FT   NON_TER       1      1       {ECO:0000313|Ensembl:ENSDARP00000124161}.
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CC   The following FT lines are automated annotations from the MyHits database.
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FT   MYHIT       141    186       iprf:TRBD [T]
SQ   SEQUENCE   186 AA;  21087 MW;  07097461E46B7D5E CRC64;
     QMSKDKPPTS RADPPQQEQM MEYFTQQILF LKEKAMLQAS VREEKKLLVE NAKLKKDIDD
     LKNLLQDTQK RKAVKLRQER ALSASIASTS AQLGEPAPST HTAPSATQTH AHTHHDGRRR
     RERRGVSCES VCVLSREQKL DVSRLDLRVA RILDVRKHPD SESLYVQEVR GKGLCRAPNI
     TSGNIK
//