ID F7BD03_XENTR Unreviewed; 859 AA.
AC F7BD03;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 10-MAY-2017, entry version 30.
DE SubName: Full=Family with sequence similarity 171 member A1 {ECO:0000313|Ensembl:ENSXETP00000043743};
GN Name=fam171a1 {ECO:0000313|Ensembl:ENSXETP00000043743,
GN ECO:0000313|Xenbase:XB-GENE-5725404};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC Silurana.
OX NCBI_TaxID=8364 {ECO:0000313|Ensembl:ENSXETP00000043743, ECO:0000313|Proteomes:UP000008143};
RN [1] {ECO:0000313|Ensembl:ENSXETP00000043743}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nigerian {ECO:0000313|Ensembl:ENSXETP00000043743};
RX PubMed=20431018; DOI=10.1126/science.1183670;
RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J.,
RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L.,
RA Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E.,
RA Detter J.C., Fletcher R., Gerhard D.S., Goodstein D., Graves T.,
RA Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M.,
RA Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N.,
RA Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D.,
RA Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B.,
RA Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M.,
RA Rokhsar D.S.;
RT "The genome of the Western clawed frog Xenopus tropicalis.";
RL Science 328:633-636(2010).
RN [2] {ECO:0000313|Ensembl:ENSXETP00000043743}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSXETP00000043743}.
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DR EMBL; AAMC01087954; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01087955; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01087956; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01087957; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01087958; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01087959; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_002939068.1; XM_002939022.4.
DR UniGene; Str.45060; -.
DR PaxDb; F7BD03; -.
DR Ensembl; ENSXETT00000043743; ENSXETP00000043743; ENSXETG00000020280.
DR GeneID; 100170195; -.
DR KEGG; xtr:100170195; -.
DR CTD; 221061; -.
DR Xenbase; XB-GENE-5725404; fam171a1.
DR eggNOG; ENOG410IKM3; Eukaryota.
DR eggNOG; ENOG410ZV9V; LUCA.
DR GeneTree; ENSGT00530000063318; -.
DR InParanoid; F7BD03; -.
DR OMA; DGRSNAH; -.
DR OrthoDB; EOG091G01Y7; -.
DR TreeFam; TF331338; -.
DR Proteomes; UP000008143; Unassembled WGS sequence.
DR Bgee; ENSXETG00000020280; -.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; -; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR018890; Uncharacterised_FAM171.
DR Pfam; PF10577; UPF0560; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000008143};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008143};
KW Signal {ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1 20 {ECO:0000256|SAM:SignalP}.
FT CHAIN 21 859 {ECO:0000256|SAM:SignalP}.
FT /FTId=PRO_5003354178.
FT TRANSMEM 306 329 Helical. {ECO:0000256|SAM:Phobius}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 36 857 ipfam:UPF0560 [T]
SQ SEQUENCE 859 AA; 94879 MW; FA2A8F36D8F9D337 CRC64;
MIGSTAVALL LCVLGCSVWG AGSKASQEHN AAAQEVTLKV QVSDVSTHQP IADAVIEIFA
NQVSAASGTT GADGTALVKL QYKLGSQLIV TATKQAYVPN SAPWRPLRLP VFSSLSLGLL
PERSATLMVY DDIVQIVSGF QGSRLQPRVH FQRRALNLPG NATYKDLTAF LTAASAPWEI
DSFPYLQGSD GNSTGNNSRF DLTPVTAVSF HLLNSDGADI PVNGPIYVTV PLPMHSSLKH
NAHVPAWRFD QKHGTWLKSS IGIIQQEGSQ LTWTYIAPQM GYWVAAMSPS NPDPVVTQDI
TSYHTMFLLA ILGGIAFILL VLLCLLLYYC RRKCLKPRQH HRKLQLSTAL DCSKKDQATS
MSHINLISPI HLEMMSSSGE VDIHTPMLKP SYNTSQDFGS REELLSHQED KSRTSLDNLT
PRGTLRQVYN KSLDHILMKS RKSAEISDEY TSTMKDEYRR SYNSVICQPL FESKDKDLLS
STNHITAGSK PNIQEQMHPV PSAPEPEQLI DRRSNECMMS RSVDHLERPT SFSRPGQLIC
YNSVDQVNDS VYRNVLPTLV IPAHYVNLPG EHPFVSQQLI VSAEQQFEIE RLQAELSHAQ
QMQQPPLSAQ AISQQHLQDG EGVEWTAQNT MMSESVSIPA SLNDAAIAQM NGEVQLLTEK
ALLELGGGRP MPHPRAWFVS LDGRSNAHIR HSYIDLQRAG KNGSNDASLD SGVDMNEPKS
GRKGRGEKFS LLQHHPSVQH PTLQEHQQLN QVNVSDSTAY TQLVYLDDMD QSPSECGTAV
CSPEDSRPFI EAPAKKSGSQ LPSLQEETIK LTAESSPVPL SSPEHEFSIN DDSGEDQGEN
KKSPWQKREE RPLLAFNME
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