MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 527 {ECO:0000313|Ensembl:ENSXETP00000034620}; |
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| MyHits synonyms | F6ZM56_XENTR , F6ZM56 , 2A96EA33943158C1 |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, iprf:ZINC_FINGER_C2H2_2 [T]; 3, ipat:ZINC_FINGER_C2H2_1 [T]; 4, ismart:ZnF_C2H2 [T].
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ID F6ZM56_XENTR Unreviewed; 558 AA.
AC F6ZM56;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 10-MAY-2017, entry version 44.
DE SubName: Full=Zinc finger protein 527 {ECO:0000313|Ensembl:ENSXETP00000034620};
GN Name=znf527 {ECO:0000313|Ensembl:ENSXETP00000034620};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC Silurana.
OX NCBI_TaxID=8364 {ECO:0000313|Ensembl:ENSXETP00000034620, ECO:0000313|Proteomes:UP000008143};
RN [1] {ECO:0000313|Ensembl:ENSXETP00000034620}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nigerian {ECO:0000313|Ensembl:ENSXETP00000034620};
RX PubMed=20431018; DOI=10.1126/science.1183670;
RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J.,
RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L.,
RA Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E.,
RA Detter J.C., Fletcher R., Gerhard D.S., Goodstein D., Graves T.,
RA Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M.,
RA Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N.,
RA Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D.,
RA Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B.,
RA Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M.,
RA Rokhsar D.S.;
RT "The genome of the Western clawed frog Xenopus tropicalis.";
RL Science 328:633-636(2010).
RN [2] {ECO:0000313|Ensembl:ENSXETP00000034620}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSXETP00000034620}.
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DR EMBL; AAMC01108328; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108329; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108330; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108331; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108332; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108333; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108334; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108335; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108336; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR STRING; 8364.ENSXETP00000044973; -.
DR PaxDb; F6ZM56; -.
DR Ensembl; ENSXETT00000034620; ENSXETP00000034620; ENSXETG00000025955.
DR Xenbase; XB-GENE-5722518; znf527.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00830000128467; -.
DR Proteomes; UP000008143; Unassembled WGS sequence.
DR ExpressionAtlas; F6ZM56; baseline.
DR GO; GO:0005622; C:intracellular; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR CDD; cd07765; KRAB_A-box; 1.
DR InterPro; IPR001909; KRAB.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 8.
DR SUPFAM; SSF57667; SSF57667; 5.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 8.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 8.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000008143};
KW Metal-binding {ECO:0000256|SAAS:SAAS00780264};
KW Reference proteome {ECO:0000313|Proteomes:UP000008143};
KW Repeat {ECO:0000256|SAAS:SAAS00780289};
KW Zinc {ECO:0000256|SAAS:SAAS00780264};
KW Zinc-finger {ECO:0000256|SAAS:SAAS00780264}.
FT DOMAIN 337 364 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 365 392 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 393 420 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 421 448 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 449 476 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 477 504 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 505 532 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 533 558 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 533 558 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 507 527 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 451 471 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 535 555 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 393 415 ismart:ZnF_C2H2 [T]
FT MYHIT 365 387 ismart:ZnF_C2H2 [T]
FT MYHIT 337 359 ismart:ZnF_C2H2 [T]
FT MYHIT 479 499 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 395 415 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 449 476 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 393 420 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 367 387 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 449 471 ismart:ZnF_C2H2 [T]
FT MYHIT 533 555 ismart:ZnF_C2H2 [T]
FT MYHIT 337 364 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 477 504 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 505 532 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 423 443 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 421 443 ismart:ZnF_C2H2 [T]
FT MYHIT 365 392 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 339 359 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 505 527 ismart:ZnF_C2H2 [T]
FT MYHIT 421 448 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 477 499 ismart:ZnF_C2H2 [T]
SQ SEQUENCE 558 AA; 62561 MW; 2A96EA33943158C1 CRC64;
XLTLEIIYLL TGEGYVIPKK KSPTVGLGAL HAPGSVIQKE NDKKILELIS NIIQLLTGEV
AIRCEDVSIY FSLEEWEYIK GNQALYREGI KEEEEEPQQL RPLAACEYKD GSDVTAHTEA
TLCCNNDGNL TNPDVSPAEQ PPPANGIKEE VASWKEGNQS DCSINPLTEQ IQGTDTPTPI
MGCSLNSSSA EDYISVVIKE EAASWEGGNQ SDCSINPLTE QIKGTDTPTP IMGCSRNNSS
AEDYISVVIK EEAASWEGGN QSDCSINPLT EQIQGIVTPI MGCSLFNTTY NGYENADTFP
HMSGIMHNTY SYSQYNNHFS YQRDFYKPQE SHKKKRFPCP DCGRCFSHRP NLERHQRIHT
GEKPYPCSYC GKFFASQPNL DRHHRTHTGE KPFPCPECGR CFASSSELIV HQRTHTGVKP
FPCPECGKSF TNSTRLRDHH RTHTGEKPYP CPECGKCFSN RINLASHKKT HTGEKPYFCT
ECGKCFGKQS HLSRHKRTHT GEKPYPCLEC GKRFSDRSVL NKHQITHTGE KPFPCTICGK
CFSYKNNLKT HSYLHNKP
//
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