MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 527 {ECO:0000313|Ensembl:ENSXETP00000044973}; |
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| MyHits synonyms | F6TUY7_XENTR , F6TUY7 , 53DC9294C7ED7BDE |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, ipat:ZINC_FINGER_C2H2_1 [T]; 3, ismart:ZnF_C2H2 [T]; 4, iprf:ZINC_FINGER_C2H2_2 [T].
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ID F6TUY7_XENTR Unreviewed; 572 AA.
AC F6TUY7;
DT 27-JUL-2011, integrated into UniProtKB/TrEMBL.
DT 27-JUL-2011, sequence version 1.
DT 10-MAY-2017, entry version 44.
DE SubName: Full=Zinc finger protein 527 {ECO:0000313|Ensembl:ENSXETP00000044973};
GN Name=znf527 {ECO:0000313|Ensembl:ENSXETP00000044973};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus;
OC Silurana.
OX NCBI_TaxID=8364 {ECO:0000313|Ensembl:ENSXETP00000044973, ECO:0000313|Proteomes:UP000008143};
RN [1] {ECO:0000313|Ensembl:ENSXETP00000044973}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nigerian {ECO:0000313|Ensembl:ENSXETP00000044973};
RX PubMed=20431018; DOI=10.1126/science.1183670;
RA Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J.,
RA Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L.,
RA Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E.,
RA Detter J.C., Fletcher R., Gerhard D.S., Goodstein D., Graves T.,
RA Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M.,
RA Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N.,
RA Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D.,
RA Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B.,
RA Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M.,
RA Rokhsar D.S.;
RT "The genome of the Western clawed frog Xenopus tropicalis.";
RL Science 328:633-636(2010).
RN [2] {ECO:0000313|Ensembl:ENSXETP00000044973}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSXETP00000044973}.
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DR EMBL; AAMC01108328; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108329; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108330; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108331; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108332; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108333; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108334; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108335; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AAMC01108336; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR STRING; 8364.ENSXETP00000044973; -.
DR PaxDb; F6TUY7; -.
DR Ensembl; ENSXETT00000044973; ENSXETP00000044973; ENSXETG00000025955.
DR Xenbase; XB-GENE-5722518; znf527.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00830000128467; -.
DR InParanoid; F6TUY7; -.
DR OrthoDB; EOG091G02KC; -.
DR TreeFam; TF325375; -.
DR Proteomes; UP000008143; Unassembled WGS sequence.
DR Bgee; ENSXETG00000025955; -.
DR ExpressionAtlas; F6TUY7; baseline.
DR GO; GO:0005622; C:intracellular; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR CDD; cd07765; KRAB_A-box; 1.
DR InterPro; IPR001909; KRAB.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 8.
DR SUPFAM; SSF57667; SSF57667; 5.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 8.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 8.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000008143};
KW Metal-binding {ECO:0000256|SAAS:SAAS00780264};
KW Reference proteome {ECO:0000313|Proteomes:UP000008143};
KW Repeat {ECO:0000256|SAAS:SAAS00780289};
KW Zinc {ECO:0000256|SAAS:SAAS00780264};
KW Zinc-finger {ECO:0000256|SAAS:SAAS00780264}.
FT DOMAIN 351 378 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 379 406 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 407 434 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 435 462 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 463 490 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 491 518 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 519 546 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 547 572 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 381 401 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 547 569 ismart:ZnF_C2H2 [T]
FT MYHIT 463 490 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 463 485 ismart:ZnF_C2H2 [T]
FT MYHIT 407 429 ismart:ZnF_C2H2 [T]
FT MYHIT 549 569 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 435 462 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 435 457 ismart:ZnF_C2H2 [T]
FT MYHIT 379 401 ismart:ZnF_C2H2 [T]
FT MYHIT 409 429 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 407 434 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 465 485 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 547 572 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 351 378 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 379 406 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 519 541 ismart:ZnF_C2H2 [T]
FT MYHIT 353 373 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 491 513 ismart:ZnF_C2H2 [T]
FT MYHIT 491 518 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 519 546 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 493 513 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 521 541 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 351 373 ismart:ZnF_C2H2 [T]
FT MYHIT 437 457 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 572 AA; 64349 MW; 53DC9294C7ED7BDE CRC64;
MGKKDKNEER KERILNLTLE IIYLLTGEGY VIPKKKSPTV GLGALHAPGS VIQKENDKKI
LELISNIIQL LTGEVAIRCE DVSIYFSLEE WEYIKGNQAL YREGIKEEEE EPQQLRPLAC
EYKDGSDVTA HTEATLCCNN DGNLTNPDVS PAEQPPPANG IKEEVASWKE GNQSDCSINP
LTEQIQGTDT PTPIMGCSLN SSSAEDYISV VIKEEAASWE GGNQSDCSIN PLTEQIKGTD
TPTPIMGCSR NNSSAEDYIS VVIKEEAASW EGGNQSDCSI NPLTEQIQGI VTPIMGCSLF
NTTYNGYENA DTFPHMSGIM HNTYSYSQYN NHFSYQRDFY KPQESHKKKR FPCPDCGRCF
SHRPNLERHQ RIHTGEKPYP CSYCGKFFAS QPNLDRHHRT HTGEKPFPCP ECGRCFASSS
ELIVHQRTHT GVKPFPCPEC GKSFTNSTRL RDHHRTHTGE KPYPCPECGK CFSNRINLAS
HKKTHTGEKP YFCTECGKCF GKQSHLSRHK RTHTGEKPYP CLECGKRFSD RSVLNKHQIT
HTGEKPFPCT ICGKCFSYKN NLKTHSYLHN KP
//
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