MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zgc:66433 {ECO:0000313|Ensembl:ENSDARP00000096990}; |
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| MyHits synonyms | F1R4Q3_DANRE , F1R4Q3 , 0A8B5A8FBE02E5D4 |
 Legends: 1, DUF4592. {ECO:0000259|Pfam:PF15262}; 2, ipfam:DUF4592 [T].
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ID F1R4Q3_DANRE Unreviewed; 991 AA.
AC F1R4Q3;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 12-APR-2017, entry version 35.
DE SubName: Full=Zgc:66433 {ECO:0000313|Ensembl:ENSDARP00000096990};
GN ORFNames=zgc:66433 {ECO:0000313|Ensembl:ENSDARP00000096990,
GN ECO:0000313|ZFIN:ZDB-GENE-030131-9832};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000096990, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000096990}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000096990};
RG Ensembl;
RL Submitted (JUL-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000096990, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000096990,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000096990}.
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DR EMBL; CR774199; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PaxDb; F1R4Q3; -.
DR PRIDE; F1R4Q3; -.
DR Ensembl; ENSDART00000106212; ENSDARP00000096990; ENSDARG00000071697.
DR ZFIN; ZDB-GENE-030131-9832; zgc:66433.
DR eggNOG; ENOG410IIB6; Eukaryota.
DR eggNOG; ENOG410YAR8; LUCA.
DR GeneTree; ENSGT00740000115532; -.
DR Proteomes; UP000000437; Chromosome 14.
DR Bgee; ENSDARG00000071697; -.
DR ExpressionAtlas; F1R4Q3; baseline and differential.
DR InterPro; IPR028030; DUF4592.
DR Pfam; PF15262; DUF4592; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 149 262 DUF4592. {ECO:0000259|Pfam:PF15262}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 149 262 ipfam:DUF4592 [T]
SQ SEQUENCE 991 AA; 107720 MW; 0A8B5A8FBE02E5D4 CRC64;
MKRRTSSQNP GIGGSPSDCD IMASGSPDVT AANEPSEATE ECSGKKKSKF QTFKNFFVKK
KRKESLSPSS ESGLKASQSS DDVNTSEPSI SHAKSDNDPG SKINLGNKAM SHDSVFVSDS
PSSENNEGLG TSQDSLHGKV KSLQLQLKQA IRLGSPPALL CGRKAEDTGA FSEDDGLPCS
PPDYSSLHTV LATPLHTSVD LTQSSLSMEA SDSEDDQMSY DASSRPSTPQ VSVPVDFSLP
ASSVSCLNSS AARHRIAVKA NARAKRKPAS RQMLDKGRDL REKLLLRDTE DKLRMVTSIG
EHECEDNESF ASEHEDEEMT DSGQIQKTSP KSSISAGDDS EGEECDHVPE SEVPQSSWEI
PVTLELQAHD DADDFLLDTG CEVVPEEQGS LLEEVLSSLK SPLASGLTLE HENVSLQSEV
EDANSKSIVA QLEDEDSKDL LNPSEPAVAM NEQAPPPDSL SESSVDSGEI SEETTEEEEL
LEFIGEESVE PSHSQVPEEH EEKRVHNAES AREDEELLES PVAFIDNVKE SDVTEDEAEL
EIQDGGDDGE RGDDGDSGND GDSGNDGDSG NGGDDGDDKL TEVEPEKSED STNDVEPQED
KPSSPEPENH EASDDERDLV VLKVENVHEP DHTERDDVWR STETSDEPEA SKSSAVEILV
SPQQESPILR CQFSKSSMSS LEKEEDPLPI RLEESGEPQE ASSEEAKVVV SEQQVPELPV
SIAEVRPRFT IAPAWQRSLA SPESQTEDTN VLSPQTTQVI VPILEERPKP ARTQSSPTLP
VQKEAVHVEE EKNPENPFGV RLRKTPVLHR YGLDGEASWS GTQTAESVGP QETPDQEQND
RKPILLKKPE LMFDPGMSAR KVPETVGRMS VGSSESPSWI SVARQKQRNF IESSSPENSP
EKLPAQVQGD VKRQDSSPSL SAPVVKEQLT QPCSPLQVFC SLELSNTSMV EKESKRISSP
STAPLAQDEP PWLALAKKKA KAWSEMPQIV Q
//
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