ID F1QVJ5_DANRE Unreviewed; 420 AA.
AC F1QVJ5;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 10-MAY-2017, entry version 50.
DE SubName: Full=Zinc finger protein 1047 {ECO:0000313|Ensembl:ENSDARP00000130042};
GN Name=znf1047 {ECO:0000313|Ensembl:ENSDARP00000130042,
GN ECO:0000313|ZFIN:ZDB-GENE-110914-204};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000130042};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000130042}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000130042};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000130042}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000130042};
RG Ensembl;
RL Submitted (OCT-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000130042}.
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DR EMBL; BX649417; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_003198571.1; XM_003198523.2.
DR UniGene; Dr.114779; -.
DR Ensembl; ENSDART00000170226; ENSDARP00000130042; ENSDARG00000100750.
DR GeneID; 100137115; -.
DR KEGG; dre:100137115; -.
DR ZFIN; ZDB-GENE-110914-204; znf1047.
DR GeneTree; ENSGT00850000132477; -.
DR OrthoDB; \N; -.
DR Proteomes; UP000000437; Chromosome 4.
DR Bgee; ENSDARG00000089711; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 2.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 12.
DR SUPFAM; SSF57667; SSF57667; 8.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 12.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 12.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 82 109 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 110 137 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 138 165 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 166 193 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 194 221 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 222 249 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 250 277 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 278 305 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 306 333 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 334 358 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 362 389 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 390 417 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 364 384 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 308 328 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 112 132 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 110 132 ismart:ZnF_C2H2 [T]
FT MYHIT 334 358 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 222 244 ismart:ZnF_C2H2 [T]
FT MYHIT 280 300 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 196 216 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 110 137 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 222 244 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 362 384 ismart:ZnF_C2H2 [T]
FT MYHIT 222 249 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 166 188 ismart:ZnF_C2H2 [T]
FT MYHIT 390 412 ismart:ZnF_C2H2 [T]
FT MYHIT 306 333 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 250 277 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 336 356 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 278 300 ismart:ZnF_C2H2 [T]
FT MYHIT 306 328 ismart:ZnF_C2H2 [T]
FT MYHIT 250 272 ismart:ZnF_C2H2 [T]
FT MYHIT 82 109 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 194 221 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 278 305 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 334 356 ismart:ZnF_C2H2 [T]
FT MYHIT 82 104 ismart:ZnF_C2H2 [T]
FT MYHIT 138 160 ismart:ZnF_C2H2 [T]
FT MYHIT 194 216 ismart:ZnF_C2H2 [T]
FT MYHIT 392 412 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 362 389 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 390 417 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 140 160 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 166 193 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 168 188 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 252 272 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 138 165 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 84 104 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 420 AA; 48446 MW; D0396FED9A3B8BCD CRC64;
MAFIKEESED VKIEETFTVK KEDLQEQTDL MVLKEETHGQ NETDEKQQFM KPQEIMTDEK
PTLTKKTSSH GRPWKSKSGC NFSCKQCRKS FSQKSNLDVH MRVHTREQPF TCEQCGKSFG
QIQGFKAHMR IHTGERKFTC QECGKSFYHV GNFAAHMRIH TGEKPFSCKQ CGKSFCHKPN
LDVHMRVHTG EKPYTCEQCG KSFGQKQSFN THMRIHTGKR PCTCQQCGKS YYNARSLAAH
MRTHTGERPF SCILCRKSFS LKLTLIAHMR VHAREKPHTC EQCGKSFGQK QDLDIHMRIH
TGEKPYTCTE CGKSFPHISS LKHHIRTHTG EKPFTCAQCG KSFTTKTSLK NHMNGHTGTI
VFTCDQCGKS LTRKDYIKKH MKIHSREDRF RCSECGKGFK SKRSLNTHMK IHNGEQNPQH
//
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