ID F1QSA0_DANRE Unreviewed; 281 AA.
AC F1QSA0;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 15-MAR-2017, entry version 34.
DE SubName: Full=Zgc:173443 {ECO:0000313|Ensembl:ENSDARP00000059013};
DE Flags: Fragment;
GN ORFNames=zgc:173443 {ECO:0000313|Ensembl:ENSDARP00000059013,
GN ECO:0000313|ZFIN:ZDB-GENE-071004-101};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000059013, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000059013}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000059013};
RG Ensembl;
RL Submitted (JUL-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000059013, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000059013,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000059013}.
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DR EMBL; BX664706; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PaxDb; F1QSA0; -.
DR Ensembl; ENSDART00000059014; ENSDARP00000059013; ENSDARG00000034403.
DR ZFIN; ZDB-GENE-071004-101; zgc:173443.
DR eggNOG; ENOG410IZ25; Eukaryota.
DR eggNOG; ENOG4111QTT; LUCA.
DR GeneTree; ENSGT00390000010019; -.
DR InParanoid; F1QSA0; -.
DR OMA; DDHIFIM; -.
DR OrthoDB; EOG091G0IBJ; -.
DR TreeFam; TF352788; -.
DR Proteomes; UP000000437; Chromosome 10.
DR ExpressionAtlas; F1QSA0; baseline.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR006624; Beta-propeller_rpt_TECPR.
DR Pfam; PF06462; Hyd_WA; 1.
DR SMART; SM00706; TECPR; 4.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21 42 Helical. {ECO:0000256|SAM:Phobius}.
FT NON_TER 1 1 {ECO:0000313|Ensembl:ENSDARP00000059013}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 112 148 ismart:TECPR [T]
FT MYHIT 46 79 ismart:TECPR [T]
FT MYHIT 159 192 ismart:TECPR [T]
FT MYHIT 200 236 ismart:TECPR [T]
FT MYHIT 222 250 ipfam:Hyd_WA [T]
SQ SEQUENCE 281 AA; 30353 MW; 4C209A716BCEFC88 CRC64;
XTTGERLAES CSNKTRSKQK LYCGAMKVYQ GVLLLLSCQI LYTLALDCTI MNGNLKQIDA
GSGSVVGVND LNQAFVLQDD VFNLVSRSLK HFSVGPAGQL GVNKTYYIFK LMSGRFVGFP
GLLKQVDAGG DQIIAGVNMN DDIFCLNMDA SNHWPSSTTP WVTLNGKLKY YSCGPYSCWG
VNSDDHIFIM KGVSSNACSG DGTFVNIPGL LSMIEVGTDG SVFGVNYEAK LFQRVGVSRS
NPAGTDWISM IACPNGHKHV SFDLGVLWVV CVDGSIRKCT L
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