ID F1QKW1_DANRE Unreviewed; 582 AA.
AC F1QKW1;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 10-MAY-2017, entry version 43.
DE SubName: Full=Zgc:114104 {ECO:0000313|Ensembl:ENSDARP00000118594};
GN ORFNames=zgc:114104 {ECO:0000313|Ensembl:ENSDARP00000118594,
GN ECO:0000313|ZFIN:ZDB-GENE-050913-63};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000118594, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000118594}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000118594};
RG Ensembl;
RL Submitted (JUL-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000118594, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000118594,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000118594}.
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DR EMBL; BX005379; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_017208301.1; XM_017352812.1.
DR UniGene; Dr.41101; -.
DR STRING; 7955.ENSDARP00000118594; -.
DR PaxDb; F1QKW1; -.
DR Ensembl; ENSDART00000139267; ENSDARP00000118594; ENSDARG00000058679.
DR GeneID; 569093; -.
DR ZFIN; ZDB-GENE-050913-63; zgc:114104.
DR eggNOG; ENOG410IHK5; Eukaryota.
DR eggNOG; ENOG410Y3E0; LUCA.
DR GeneTree; ENSGT00510000046606; -.
DR InParanoid; F1QKW1; -.
DR OMA; AHMQGNK; -.
DR OrthoDB; EOG091G0GWT; -.
DR TreeFam; TF350019; -.
DR Proteomes; UP000000437; Chromosome 21.
DR Bgee; ENSDARG00000058679; -.
DR GO; GO:0005622; C:intracellular; IEA:GOC.
DR GO; GO:0002039; F:p53 binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0072332; P:intrinsic apoptotic signaling pathway by p53 class mediator; IBA:GO_Central.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 4.
DR SMART; SM00451; ZnF_U1; 4.
DR SUPFAM; SSF57667; SSF57667; 4.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Metal-binding {ECO:0000256|SAAS:SAAS00771733};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW Zinc {ECO:0000256|SAAS:SAAS00771733};
KW Zinc-finger {ECO:0000256|SAAS:SAAS00771733}.
FT DOMAIN 116 138 C2H2-type. {ECO:0000259|PROSITE:PS00028}.
FT COILED 515 567 {ECO:0000256|SAM:Coils}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 55 89 ismart:ZnF_U1 [T]
FT MYHIT 111 145 ismart:ZnF_U1 [T]
FT MYHIT 242 276 ismart:ZnF_U1 [T]
FT MYHIT 114 138 ismart:ZnF_C2H2 [T]
FT MYHIT 116 138 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 198 222 ismart:ZnF_C2H2 [T]
FT MYHIT 58 82 ismart:ZnF_C2H2 [T]
FT MYHIT 245 269 ismart:ZnF_C2H2 [T]
FT MYHIT 195 229 ismart:ZnF_U1 [T]
SQ SEQUENCE 582 AA; 66357 MW; 5EEFE22FD027428A CRC64;
MSELEASVSC SPQCAETDHI KNTDDINPEI VQNTNTNISQ VEGTQNDDNL LKGLLTDSFC
HVCEASLIHE SQRVSHYEGK KHAQRVRMYL NKKAKMNKQR QESEGLLIGL SAEKFCEMCS
MVFSSPTVAK SHYEGKVHAK NMRKNNVPPP RVLPAPVTEP TAPIAIPSEV PVQNQVTQEQ
KDTSGLADQG VDLSDPNKYC PLCSASFNNP LVAQQHYSGR KHQRNQARQD MLDQMGEKSE
QASSLTCPIC CLTLSSIEMY QSHMQGNKHL IKEKKVIDLC KSQKKVYNSF QDELADYIQV
QKARGLDPKA GQGPVGHASK AEEDESPTED PQTAEEIPHP PPSHVIPRFP PPAFPRPHWR
PPFQSEISPF GFGMRGPVPR YPPGYMLPHS HPPLIPAQQY KRARSPESFS SSSFSDSSSY
TSSSSESSSS YDSRERRRSK RKTRKQGKSR RAQEEGGDSE RKKRRKEDRR GSVEKEDDGH
KKCKERRRRS SSEDEESRSK RRSRKRHADE QHVKRRKEEE VLEKQQVEVQ NEEGRMEEHV
EESKDAKQKH KKEKKKGKEK INQEDNRTEE ERLWDETILG VF
//
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