MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=Zgc:194990 {ECO:0000313|Ensembl:ENSDARP00000091764}; |
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MyHits synonyms | F1QIK4_DANRE , F1QIK4 , 61CC2AEB3701F60D |
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ID F1QIK4_DANRE Unreviewed; 410 AA. AC F1QIK4; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 03-MAY-2011, sequence version 1. DT 10-MAY-2017, entry version 47. DE SubName: Full=Zgc:194990 {ECO:0000313|Ensembl:ENSDARP00000091764}; GN ORFNames=zgc:194990 {ECO:0000313|Ensembl:ENSDARP00000091764, GN ECO:0000313|ZFIN:ZDB-GENE-081022-171}; OS Danio rerio (Zebrafish) (Brachydanio rerio). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000091764, ECO:0000313|Proteomes:UP000000437}; RN [1] {ECO:0000313|Ensembl:ENSDARP00000091764} RP IDENTIFICATION. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000091764}; RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. RN [2] {ECO:0000313|Ensembl:ENSDARP00000112936} RP IDENTIFICATION. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000112936}; RG Ensembl; RL Submitted (FEB-2012) to UniProtKB. RN [3] {ECO:0000313|Ensembl:ENSDARP00000091764, ECO:0000313|Proteomes:UP000000437} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000091764, RC ECO:0000313|Proteomes:UP000000437}; RX PubMed=23594743; DOI=10.1038/nature12111; RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T., RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G., RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P., RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D., RA Saunders D., Wallis J., Babbage A., Hammond S., RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., RA Stemple D.L.; RT "The zebrafish reference genome sequence and its relationship to the RT human genome."; RL Nature 496:498-503(2013). CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000091764}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU861446; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR RefSeq; XP_005166941.1; XM_005166884.3. DR UniGene; Dr.82685; -. DR STRING; 7955.ENSDARP00000091764; -. DR Ensembl; ENSDART00000100992; ENSDARP00000091764; ENSDARG00000069407. DR Ensembl; ENSDART00000135738; ENSDARP00000112936; ENSDARG00000069407. DR GeneID; 568410; -. DR ZFIN; ZDB-GENE-081022-171; zgc:194990. DR eggNOG; KOG2177; Eukaryota. DR eggNOG; ENOG4111G04; LUCA. DR GeneTree; ENSGT00760000118993; -. DR OMA; QLFIMEL; -. DR OrthoDB; EOG091G05AM; -. DR TreeFam; TF351095; -. DR Proteomes; UP000000437; Chromosome 8. DR Bgee; ENSDARG00000069407; -. DR InterPro; IPR001870; B30.2/SPRY. DR InterPro; IPR003879; Butyrophylin. DR InterPro; IPR013320; ConA-like_dom. DR InterPro; IPR006574; PRY. DR InterPro; IPR003877; SPRY_dom. DR Pfam; PF13765; PRY; 1. DR Pfam; PF00622; SPRY; 1. DR PRINTS; PR01407; BUTYPHLNCDUF. DR SMART; SM00589; PRY; 1. DR SMART; SM00449; SPRY; 1. DR SUPFAM; SSF49899; SSF49899; 1. DR PROSITE; PS50188; B302_SPRY; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000437}; KW Reference proteome {ECO:0000313|Proteomes:UP000000437}. FT DOMAIN 207 399 B30.2/SPRY. FT {ECO:0000259|PROSITE:PS50188}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 227 275 ipfam:PRY [T] FT MYHIT 279 382 ipfam:SPRY [T] FT MYHIT 224 276 ismart:PRY [T] FT MYHIT 207 399 iprf:B302_SPRY [T] FT MYHIT 277 396 ismart:SPRY [T] SQ SEQUENCE 410 AA; 47845 MW; 61CC2AEB3701F60D CRC64; MMKDCLQFLI EPAKKLKFRF KETRKKVKHV KKEPLSESQL FIMELARELN RICQRSDVLA HIWTGEDVWP PHTCREFIVE TANILEMKEN TEKPVQVYVD LHPEKRDWKT HLLSMLEQGG EYDMGPHKRI IMDWTRAQRN THPHGIWPGE AVLMMLDDLE LQWKRGLLSH LQSAVELLIG ATLGEHLDKE LIPRLWLVQK QKTQKIECTG YIPHIVWNWI CDAAVEVSFD PETANPSLLL SEDCKRLQCG LERRPVPCNL RRFDGWWCCF ASQGFSSGRH YWEVEVGDRD WRLGVAKESA LCKGYRPLNT QSGYLTLRLE RGSELKALTA PTTPLPTTLI PRRVGVYLDY DEGQLSFYDI QKRAHIYTYS QKFTEKLYPV FGTVEMVREM VIRPADLREP CLCKGQCLFC // |