Entry euk:F1QH07_DANRE

ID   F1QH07_DANRE            Unreviewed;       282 AA.
AC   F1QH07;
DT   03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT   03-MAY-2011, sequence version 1.
DT   15-MAR-2017, entry version 41.
DE   SubName: Full=Zgc:101853 {ECO:0000313|Ensembl:ENSDARP00000110185};
GN   ORFNames=zgc:101853 {ECO:0000313|Ensembl:ENSDARP00000110185,
GN   ECO:0000313|ZFIN:ZDB-GENE-041212-13};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000110185, ECO:0000313|Proteomes:UP000000437};
RN   [1] {ECO:0000313|Ensembl:ENSDARP00000110185}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000110185};
RG   Ensembl;
RL   Submitted (FEB-2012) to UniProtKB.
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000110185, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000110185,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
CC   -!- CAUTION: The sequence shown here is derived from an Ensembl
CC       automatic analysis pipeline and should be considered as
CC       preliminary data. {ECO:0000313|Ensembl:ENSDARP00000110185}.
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DR   EMBL; CABZ01076995; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CABZ01076996; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CU905501; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   STRING; 7955.ENSDARP00000124114; -.
DR   PaxDb; F1QH07; -.
DR   PRIDE; F1QH07; -.
DR   Ensembl; ENSDART00000129872; ENSDARP00000110185; ENSDARG00000036894.
DR   ZFIN; ZDB-GENE-041212-13; zgc:101853.
DR   eggNOG; KOG2241; Eukaryota.
DR   eggNOG; COG0073; LUCA.
DR   GeneTree; ENSGT00790000123080; -.
DR   Proteomes; UP000000437; Chromosome 23.
DR   Bgee; ENSDARG00000036894; -.
DR   ExpressionAtlas; F1QH07; baseline.
DR   GO; GO:0000049; F:tRNA binding; IEA:InterPro.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR002547; tRNA-bd_dom.
DR   Pfam; PF01588; tRNA_bind; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   PROSITE; PS50886; TRBD; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT   DOMAIN      121    222       TRNA-binding.
FT                                {ECO:0000259|PROSITE:PS50886}.
FT   COILED       24     58       {ECO:0000256|SAM:Coils}.
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CC   The following FT lines are automated annotations from the MyHits database.
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FT   MYHIT       121    222       iprf:TRBD [T]
FT   MYHIT       127    219       ipfam:tRNA_bind [T]
SQ   SEQUENCE   282 AA;  31662 MW;  8E710B162FC1EB42 CRC64;
     MEYFTQQILF LKEKAMLQAS VREEKKLLVE NAKLKKDIDD LKNLLQDTQK RKAVKLRQER
     ALSASIASTS AQLGEPAPST HTAPSATQTH AHTHHDGRRR RERRGVSCES VCVLSREQKL
     DVSRLDLRVA RILDVRKHPD SESLYVQEVE LGEHAPRTVV SGLTNHVPPE QLLGSLVVLL
     CNVRSVKVRG VQSQARLLCA VNQERMEPLT PPTGAQPGDR VTFQLYPGEP EKELNPKQRL
     WERLLPDLRI DARGVATYRG VAFEVRGKGL CRAPNITSGN IK
//