MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
Description | SubName: Full=Zgc:100911 {ECO:0000313|Ensembl:ENSDARP00000053570}; |
![]() |
|
MyHits synonyms | F1QGE8_DANRE , F1QGE8 , E9CE9842A773FF4A |
![]() Legends: 1, TRANSMEM Helical. {ECO:0000256|SAM:Phobius}; 2, PAP2_C. {ECO:0000259|Pfam:PF14360}.
| |
ID F1QGE8_DANRE Unreviewed; 321 AA. AC F1QGE8; DT 03-MAY-2011, integrated into UniProtKB/TrEMBL. DT 20-JAN-2016, sequence version 2. DT 12-APR-2017, entry version 43. DE SubName: Full=Zgc:100911 {ECO:0000313|Ensembl:ENSDARP00000053570}; GN ORFNames=zgc:100911 {ECO:0000313|Ensembl:ENSDARP00000053570, GN ECO:0000313|ZFIN:ZDB-GENE-040801-162}; OS Danio rerio (Zebrafish) (Brachydanio rerio). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; OC Cyprinidae; Danio. OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000053570, ECO:0000313|Proteomes:UP000000437}; RN [1] {ECO:0000313|Ensembl:ENSDARP00000053570} RP IDENTIFICATION. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000053570}; RG Ensembl; RL Submitted (JUL-2011) to UniProtKB. RN [2] {ECO:0000313|Ensembl:ENSDARP00000053570, ECO:0000313|Proteomes:UP000000437} RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000053570, RC ECO:0000313|Proteomes:UP000000437}; RX PubMed=23594743; DOI=10.1038/nature12111; RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T., RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G., RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P., RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G., RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D., RA Saunders D., Wallis J., Babbage A., Hammond S., RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C., RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J., RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., RA Stemple D.L.; RT "The zebrafish reference genome sequence and its relationship to the RT human genome."; RL Nature 496:498-503(2013). CC -!- CAUTION: The sequence shown here is derived from an Ensembl CC automatic analysis pipeline and should be considered as CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000053570}. CC ----------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution-NoDerivs License CC ----------------------------------------------------------------------- DR EMBL; CU905501; -; NOT_ANNOTATED_CDS; Genomic_DNA. DR STRING; 7955.ENSDARP00000125103; -. DR Ensembl; ENSDART00000053571; ENSDARP00000053570; ENSDARG00000036897. DR ZFIN; ZDB-GENE-040801-162; zgc:100911. DR eggNOG; KOG3058; Eukaryota. DR eggNOG; ENOG410XNSC; LUCA. DR GeneTree; ENSGT00390000001630; -. DR OMA; HITMAKS; -. DR OrthoDB; EOG091G0J6C; -. DR TreeFam; TF314547; -. DR Reactome; R-DRE-1660661; Sphingolipid de novo biosynthesis. DR Proteomes; UP000000437; Chromosome 23. DR Bgee; ENSDARG00000036897; -. DR ExpressionAtlas; F1QGE8; baseline. DR GO; GO:0030176; C:integral component of endoplasmic reticulum membrane; IBA:GO_Central. DR GO; GO:0030173; C:integral component of Golgi membrane; IBA:GO_Central. DR GO; GO:0005887; C:integral component of plasma membrane; IBA:GO_Central. DR GO; GO:0047493; F:ceramide cholinephosphotransferase activity; IBA:GO_Central. DR GO; GO:0033188; F:sphingomyelin synthase activity; IBA:GO_Central. DR GO; GO:0046513; P:ceramide biosynthetic process; IBA:GO_Central. DR GO; GO:0006686; P:sphingomyelin biosynthetic process; IBA:GO_Central. DR InterPro; IPR025749; Sphingomyelin_synth-like_dom. DR Pfam; PF14360; PAP2_C; 1. PE 4: Predicted; KW Complete proteome {ECO:0000313|Proteomes:UP000000437}; KW Membrane {ECO:0000256|SAM:Phobius}; KW Reference proteome {ECO:0000313|Proteomes:UP000000437}; KW Transmembrane {ECO:0000256|SAM:Phobius}; KW Transmembrane helix {ECO:0000256|SAM:Phobius}. FT TRANSMEM 92 112 Helical. {ECO:0000256|SAM:Phobius}. FT TRANSMEM 138 159 Helical. {ECO:0000256|SAM:Phobius}. FT TRANSMEM 171 189 Helical. {ECO:0000256|SAM:Phobius}. FT TRANSMEM 236 255 Helical. {ECO:0000256|SAM:Phobius}. FT TRANSMEM 262 283 Helical. {ECO:0000256|SAM:Phobius}. FT DOMAIN 232 307 PAP2_C. {ECO:0000259|Pfam:PF14360}. CC -------------------------------------------------------------------------- CC The following FT lines are automated annotations from the MyHits database. CC -------------------------------------------------------------------------- FT MYHIT 232 307 ipfam:PAP2_C [T] SQ SEQUENCE 321 AA; 37439 MW; E9CE9842A773FF4A CRC64; MAQTQLLDEQ DDGQISEYHV MVTVEDSTRP QTPPTGRTHP YQDTPPFSQV DDKPKDSKQR GFRRIRKNQD YVHITMAKSS TSRLPSEWWK TGIAFIWACF NLVLTTAMIT IVHDRVPDKS VSPPLPDKFF DYVPRKEWAF RVTEVFGMIL VVLWFIQWLS LKYRAIVGRR FFFLQGLLYM YRMVTMYITT LPVPSMHMEC APKLQNNSYE KLQRAYQLVT GAGLSITGSH RMCGDFLYSG HTVMLTLTFL FIYEYSPRSR LWTVYHVICG LLSAMGMICI LMGHEHYSLD VVVAYYITSR LFYWYHTMAN NQVKTAKLHS V // |