ID F1QE91_DANRE Unreviewed; 613 AA.
AC F1QE91;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 10-MAY-2017, entry version 49.
DE SubName: Full=Zgc:175280 {ECO:0000313|Ensembl:ENSDARP00000137678};
GN ORFNames=zgc:175280 {ECO:0000313|Ensembl:ENSDARP00000137678,
GN ECO:0000313|ZFIN:ZDB-GENE-080219-39};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000137678, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000137678, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000137678,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
RN [2] {ECO:0000313|Ensembl:ENSDARP00000137678}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000137678};
RG Ensembl;
RL Submitted (NOV-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000137678}.
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DR EMBL; CU861887; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR Ensembl; ENSDART00000168994; ENSDARP00000137678; ENSDARG00000099111.
DR ZFIN; ZDB-GENE-080219-39; zgc:175280.
DR GeneTree; ENSGT00760000119151; -.
DR Proteomes; UP000000437; Chromosome 5.
DR Bgee; ENSDARG00000078579; -.
DR ExpressionAtlas; F1QE91; baseline.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0015171; F:amino acid transmembrane transporter activity; IEA:InterPro.
DR InterPro; IPR002293; AA/rel_permease1.
DR InterPro; IPR004755; Cat_AA_permease.
DR InterPro; IPR029485; CAT_C.
DR Pfam; PF13520; AA_permease_2; 1.
DR Pfam; PF13906; AA_permease_C; 1.
DR TIGRFAMs; TIGR00906; 2A0303; 1.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 35 54 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 66 87 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 99 123 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 165 182 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 191 209 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 247 267 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 288 315 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 335 363 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 384 404 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 410 429 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 465 484 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 496 517 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 526 547 Helical. {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 559 579 Helical. {ECO:0000256|SAM:Phobius}.
FT DOMAIN 528 576 AA_permease_C.
FT {ECO:0000259|Pfam:PF13906}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 32 504 ipfam:AA_permease_2 [T]
FT MYHIT 528 576 ipfam:AA_permease_C [T]
SQ SEQUENCE 613 AA; 66655 MW; 96F5E39251C2F055 CRC64;
MSCNKVLSFL KSLSRRKPLE PDGEESNFKR CLSTLDLVAL GVGSTLGAGV YVLSGEVART
VSGPSIIVSF FIAAVASVFA GLCYAEFGAR VPKTGSAYLY SYVTVGEVWA FITGWNLLLS
YVIGTSSVAR AWSGTFDDLI GNKIGNFFSA NTPMNLPGLA PYPDFFAAAL IMVLAGILAF
GVKESAIVNK IFTGLNMVVL VFVIISGFIK GDIGNWQITP EEIFNYTITA NLSISNETLS
SFGQGGFFPF GFEGTFAGAA TCFYAFVGFD CIATTGEEVR NPQKSIPIGI VASLLICFLA
YFGVSAALTL MMPYYRLNLQ SPLPVAFEYV GWEPAKYAVA VGSLCALSTS LLGAMFPMPR
VLFAMARDGL LFSPLSKMSS RQSPVIATIA SGVVAAIMAM VFDLKALVDM MSIGTLFAYT
LVAICILILR YQEEPAVISE KADVQSKKWN PFRPPNTATA KSSKAVSLLT LLTIVFSIIL
SVIITKGVEA GLIAEWWMIL IITVVAVGFL LTIIIIWRQP QNRTKAAFMV PLLPLLPIFS
TFINVYLMLQ LGSETWIRYA VWMAVGLLIY FCYGVHFSVQ RKRNKSQKHP EMADAKLEDE
QRNGSIIQTQ TKL
//
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