ID F1Q9K5_DANRE Unreviewed; 667 AA.
AC F1Q9K5;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 2.
DT 10-MAY-2017, entry version 50.
DE SubName: Full=Zinc finger protein 1013 {ECO:0000313|Ensembl:ENSDARP00000115168};
GN Name=znf1013 {ECO:0000313|Ensembl:ENSDARP00000115168,
GN ECO:0000313|ZFIN:ZDB-GENE-131126-19};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000115168, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000115168}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000115168};
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000115168, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000115168,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000115168}.
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DR EMBL; BX248582; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR STRING; 7955.ENSDARP00000115168; -.
DR PaxDb; F1Q9K5; -.
DR Ensembl; ENSDART00000148167; ENSDARP00000115168; ENSDARG00000092507.
DR ZFIN; ZDB-GENE-131126-19; znf1013.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00870000136638; -.
DR InParanoid; F1Q9K5; -.
DR OMA; HERNNDR; -.
DR OrthoDB; EOG091G02KC; -.
DR TreeFam; TF343410; -.
DR Proteomes; UP000000437; Chromosome 15.
DR ExpressionAtlas; F1Q9K5; baseline.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 20.
DR SUPFAM; SSF57667; SSF57667; 12.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 19.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 20.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 83 110 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 111 138 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 139 166 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 167 194 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 195 222 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 223 250 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 251 278 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 279 306 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 307 334 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 335 362 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 363 390 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 391 418 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 419 446 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 447 474 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 475 502 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 503 530 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 531 558 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 559 586 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 587 614 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 615 634 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 139 161 ismart:ZnF_C2H2 [T]
FT MYHIT 83 105 ismart:ZnF_C2H2 [T]
FT MYHIT 561 581 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 391 418 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 363 390 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 111 138 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 167 194 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 139 166 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 421 441 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 337 357 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 531 553 ismart:ZnF_C2H2 [T]
FT MYHIT 393 413 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 307 334 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 197 217 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 335 357 ismart:ZnF_C2H2 [T]
FT MYHIT 391 413 ismart:ZnF_C2H2 [T]
FT MYHIT 225 245 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 279 301 ismart:ZnF_C2H2 [T]
FT MYHIT 169 189 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 365 385 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 587 614 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 251 278 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 615 634 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 503 525 ismart:ZnF_C2H2 [T]
FT MYHIT 223 245 ismart:ZnF_C2H2 [T]
FT MYHIT 419 446 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 251 273 ismart:ZnF_C2H2 [T]
FT MYHIT 559 581 ismart:ZnF_C2H2 [T]
FT MYHIT 167 189 ismart:ZnF_C2H2 [T]
FT MYHIT 475 497 ismart:ZnF_C2H2 [T]
FT MYHIT 531 558 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 111 133 ismart:ZnF_C2H2 [T]
FT MYHIT 447 469 ismart:ZnF_C2H2 [T]
FT MYHIT 503 530 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 223 250 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 113 133 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 363 385 ismart:ZnF_C2H2 [T]
FT MYHIT 615 635 ismart:ZnF_C2H2 [T]
FT MYHIT 449 469 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 195 222 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 307 329 ismart:ZnF_C2H2 [T]
FT MYHIT 505 525 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 475 502 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 447 474 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 477 497 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 309 329 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 335 362 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 279 306 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 253 273 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 141 161 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 83 110 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 419 441 ismart:ZnF_C2H2 [T]
FT MYHIT 281 301 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 85 105 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 533 553 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 587 609 ismart:ZnF_C2H2 [T]
FT MYHIT 195 217 ismart:ZnF_C2H2 [T]
FT MYHIT 559 586 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 589 609 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 667 AA; 75652 MW; BF9AB200A1F6CBAA CRC64;
MAFVKEESED VKIDETFAVK HEDPEEQKDL TKLKEESQEL DKVEEEDHIS AEEHELLTGG
KSEHAEKKSS RKRSKKLFFN KSFTCHQCGK SFTQKQDMKV HMRVHTGEKP FACQQCGQGF
TQKGNLSAHM RAHNGEKPFT CTQCGQGFTR KEILNGHMRI HTGEKPFTCQ QCGQSFTQRG
NLIAHMRGHN KVKPFSCAEC GQGFTQKGNL KAHMRAHSGE KPFDCSLCGQ SFARKEILNA
HLRVHTGEKP YICTKCGQSF TQKGNLNSHM RRHSGEKPHT CSQCGQSFTR KEVLTSHMRI
HTGEKPYTCT ECGRSFAQKG NYNTHMRGHR GEKPHTCTQC GRGFTRNEVL IAHMRVHTGE
KPFTCQQCGQ SFTQRGNLEG HMRSHGAEKP FVCTQCGQSF TQKGNLNAHM RAHNGDKPFT
CSECGQNFTR KEILASHMRI HTGEKPYTCA HCGQRFRQRG NLTAHLRIHN GDKPFACTQC
EQSFTRKEIL NAHIRVHTGE KPFTCQQCGQ SFTQKGNLNS HMRCHNGDKP FACSHCERSF
SRKETLDGHM RVHTGEKPFV CQQCGQSFKL QGNLRVHTRC HNGEKPFACT QCERSFSRKE
TLDGHMSVHT GEKPFSCQQC GQSFKQKRSL RAHMGQLLFC VGLDGPTPHF EEWRQVVVDH
LGEGLGI
//
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