ID F1MAP6_RAT Unreviewed; 546 AA.
AC F1MAP6;
DT 03-MAY-2011, integrated into UniProtKB/TrEMBL.
DT 03-MAY-2011, sequence version 1.
DT 10-MAY-2017, entry version 39.
DE SubName: Full=Coiled-coil domain-containing 173 {ECO:0000313|Ensembl:ENSRNOP00000069798};
GN Name=Ccdc173 {ECO:0000313|Ensembl:ENSRNOP00000069798,
GN ECO:0000313|RGD:1308818};
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
OC Muroidea; Muridae; Murinae; Rattus.
OX NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000069798, ECO:0000313|Proteomes:UP000002494};
RN [1] {ECO:0000313|Ensembl:ENSRNOP00000069798, ECO:0000313|Proteomes:UP000002494}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000069798,
RC ECO:0000313|Proteomes:UP000002494};
RX PubMed=15057822; DOI=10.1038/nature02426;
RG Rat Genome Sequencing Project Consortium;
RA Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
RA Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
RA Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
RA Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
RA Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
RA Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
RA Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T.,
RA Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A.,
RA Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M.,
RA Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K.,
RA Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S.,
RA Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J.,
RA Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y.,
RA Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A.,
RA Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J.,
RA D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R.,
RA Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A.,
RA Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E.,
RA Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E.,
RA Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
RA Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D.,
RA Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M.,
RA Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O.,
RA Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O.,
RA Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H.,
RA Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S.,
RA Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J.,
RA Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
RA Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E.,
RA Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F.,
RA Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K.,
RA Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S.,
RA Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M.,
RA Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M.,
RA Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A.,
RA Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S.,
RA Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G.,
RA Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H.,
RA Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R.,
RA Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M.,
RA Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H.,
RA Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S.,
RA Collins F.S.;
RT "Genome sequence of the Brown Norway rat yields insights into
RT mammalian evolution.";
RL Nature 428:493-521(2004).
RN [2] {ECO:0000313|Ensembl:ENSRNOP00000069798}
RP IDENTIFICATION.
RC STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000069798};
RG Ensembl;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSRNOP00000069798}.
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DR EMBL; AC123453; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; NP_001120958.1; NM_001127486.1.
DR UniGene; Rn.123606; -.
DR PaxDb; F1MAP6; -.
DR Ensembl; ENSRNOT00000089637; ENSRNOP00000069798; ENSRNOG00000052954.
DR GeneID; 311113; -.
DR KEGG; rno:311113; -.
DR UCSC; RGD:1308818; rat.
DR CTD; 129881; -.
DR RGD; 1308818; Ccdc173.
DR eggNOG; ENOG410IERG; Eukaryota.
DR eggNOG; ENOG410ZE2M; LUCA.
DR GeneTree; ENSGT00730000111149; -.
DR OMA; AKKEMHF; -.
DR OrthoDB; EOG091G0JME; -.
DR PhylomeDB; F1MAP6; -.
DR Proteomes; UP000002494; Chromosome 3.
DR Bgee; ENSRNOG00000030535; -.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Complete proteome {ECO:0000313|Proteomes:UP000002494};
KW Reference proteome {ECO:0000313|Proteomes:UP000002494}.
FT COILED 94 121 {ECO:0000256|SAM:Coils}.
FT COILED 181 211 {ECO:0000256|SAM:Coils}.
FT COILED 213 247 {ECO:0000256|SAM:Coils}.
SQ SEQUENCE 546 AA; 65291 MW; 0361686FB97EABBE CRC64;
MQVRYGRRSG KAKERAGMES YEKEEIPYPP LLPSTVDLQQ VTIIPHAEWE RIRDSLNKLT
REAAVLRAER TAKKNMHMKS QELVKHWTNT YAGMKEQKLR AKQKRDEELE AERQILDLEE
EIYKQGERKK AIENAKQYQF YQTERVKRFH SGLLLSRVMK ERDVQIQYKK NAVKSDEKWE
EQVKLNDAKA LKEDQEKLEK QRRERVALAK DHLKQIKEHE EEEETRKKSE EKDAEEIKRQ
NLLYEIEMKK KLSRKQEEID ASRKRFFDNM RDKNIIRAVE QQQQEEEEEK TRKFIKAKKR
LIQMRKDKEA ETHRLMEERR ERINNFLSKL IKEKLDTEDL IMSRDIADID TELDKREKEK
HEKMQADLKA IAEHRASVMK NKEEEEKQRK IESKEELQAV LKADKMFQEL EKEKKLKANK
EKLEVQDAHI HQIALNKFNS KQLKEEDLNY WRLTEALAVE KEKEFEKYAR EVINFESEST
KKYTYPMVKA VQEGVGGGRG PPFVGRGGIR PSYQANDVTG VQLPFYNSQG SKYDFQKSKR
RLGFTW
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