ID E9QEP0_DANRE Unreviewed; 398 AA.
AC E9QEP0;
DT 05-APR-2011, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 2.
DT 10-MAY-2017, entry version 45.
DE SubName: Full=Zinc finger protein 1062 {ECO:0000313|Ensembl:ENSDARP00000112796};
GN Name=znf1062 {ECO:0000313|Ensembl:ENSDARP00000112796,
GN ECO:0000313|ZFIN:ZDB-GENE-120709-37};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000112796, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000112796}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000112796};
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000112796, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000112796,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000112796}.
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DR EMBL; BX571664; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CR382294; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR STRING; 7955.ENSDARP00000112796; -.
DR PaxDb; E9QEP0; -.
DR Ensembl; ENSDART00000131561; ENSDARP00000112796; ENSDARG00000095149.
DR ZFIN; ZDB-GENE-120709-37; znf1062.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00860000134123; -.
DR InParanoid; E9QEP0; -.
DR OrthoDB; EOG091G02KC; -.
DR TreeFam; TF350925; -.
DR Proteomes; UP000000437; Chromosome 4.
DR Bgee; ENSDARG00000095149; -.
DR ExpressionAtlas; E9QEP0; baseline.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 12.
DR SUPFAM; SSF57667; SSF57667; 7.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 10.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 12.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 65 92 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 93 120 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 121 148 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 149 176 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 177 204 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 205 232 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 233 260 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 261 288 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 289 316 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 317 341 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 345 373 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 374 398 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 93 115 ismart:ZnF_C2H2 [T]
FT MYHIT 317 341 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 95 115 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 289 316 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 177 204 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 235 255 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 177 199 ismart:ZnF_C2H2 [T]
FT MYHIT 65 87 ismart:ZnF_C2H2 [T]
FT MYHIT 376 396 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 121 143 ismart:ZnF_C2H2 [T]
FT MYHIT 179 199 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 233 255 ismart:ZnF_C2H2 [T]
FT MYHIT 345 373 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 121 148 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 67 87 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 149 176 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 93 120 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 261 288 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 263 283 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 291 311 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 374 396 ismart:ZnF_C2H2 [T]
FT MYHIT 317 339 ismart:ZnF_C2H2 [T]
FT MYHIT 65 92 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 205 227 ismart:ZnF_C2H2 [T]
FT MYHIT 123 143 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 149 171 ismart:ZnF_C2H2 [T]
FT MYHIT 374 398 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 233 260 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 261 283 ismart:ZnF_C2H2 [T]
FT MYHIT 207 227 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 289 311 ismart:ZnF_C2H2 [T]
FT MYHIT 345 365 ismart:ZnF_C2H2 [T]
FT MYHIT 205 232 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 151 171 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 398 AA; 46009 MW; F55BE5290385F358 CRC64;
MNEQNEMEEK LQEITTDEKP TLTKKTSSRG RPRKSKSACN FGSKQSRKSF SQKSNLDVHT
REKPYTCEQC GKSFGHIQGF ENHMRIHTGE KPFSCKQCGK SFTQKANLDV HMRVHTKERP
YTCEQCGKSF TYKQGFTTHM RIHTGERPYT CQQCEKSFYH PGNFAVHMRI HTGERPYTCQ
QCGKSFYQSG NFAAHMRIHT GERPYSCIQC GKSFKQNCTL EIHMRTHTGD KSFICTHCGK
RFSQKHDLNI HMRIHTGKKP HTCTQCGKRF TQKTSLDNHM SIHTGEKPYR CTECGKTFPH
KRTLKHHMRT HTGEKSFACA QCRKRFTTKA SLKNLMDGHT GTIVLTCDQC EKSLTRKDSI
RKHIRKINSG EDPFRCSECG KGFKHKRSLS THLKLHNG
//
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