ID E7FFC5_DANRE Unreviewed; 822 AA.
AC E7FFC5;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 2.
DT 12-APR-2017, entry version 44.
DE SubName: Full=Family with sequence similarity 171, member A1 {ECO:0000313|Ensembl:ENSDARP00000097987};
GN Name=fam171a1 {ECO:0000313|Ensembl:ENSDARP00000097987,
GN ECO:0000313|ZFIN:ZDB-GENE-061208-1};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000097987, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000097987}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000097987};
RG Ensembl;
RL Submitted (JUL-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000097987, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000097987,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000097987}.
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DR EMBL; BX322614; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PaxDb; E7FFC5; -.
DR PeptideAtlas; E7FFC5; -.
DR Ensembl; ENSDART00000109450; ENSDARP00000097987; ENSDARG00000079788.
DR ZFIN; ZDB-GENE-061208-1; fam171a1.
DR eggNOG; ENOG410IKM3; Eukaryota.
DR eggNOG; ENOG410ZV9V; LUCA.
DR GeneTree; ENSGT00530000063318; -.
DR InParanoid; E7FFC5; -.
DR OMA; DGRSNAH; -.
DR OrthoDB; EOG091G01Y7; -.
DR TreeFam; TF331338; -.
DR Proteomes; UP000000437; Chromosome 16.
DR Bgee; ENSDARG00000079788; -.
DR ExpressionAtlas; E7FFC5; baseline.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; -; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR018890; Uncharacterised_FAM171.
DR Pfam; PF10577; UPF0560; 1.
PE 1: Evidence at protein level;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Proteomics identification {ECO:0000213|PeptideAtlas:E7FFC5};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 272 295 Helical. {ECO:0000256|SAM:Phobius}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
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FT MYHIT 2 820 ipfam:UPF0560 [T]
SQ SEQUENCE 822 AA; 89880 MW; EC6304B9BF8B423E CRC64;
EVVLKVHLSD SSTHQPLSGV TVEVFTNHTP VSSDVSGADG NAFIRFPYRL VDLLVVTATK
RGYVPNSVPW RPSRLPVFSS LSLDLLPERA ATLMVYEDVV EIVSGFQDAK LQPRVQFQRR
ALSLPSNATY TNLTAFLTVS SSTQDTQYFP YLQGLHPNFT GSERKFELTP IAALSVHLLG
SDGVELHVSE PISVSVPLPA NSGLKENDHI PAWRFDPKYG RWTRPNLGYV QREGKQLTLT
YIAPQLGYWV AAMSPINTGP VVAKDISTYH TVFLLVILGG MALILLFLLC LLLYYCRRKC
TRLRPAHRKF TLSSALDGSK RDQATSMSHL NLINETHLDQ NGAEPDMHTP MLKPTPYDSS
TNELATSRGE LHSRGSNHYK HSVEIFPLKS ACSNNPSEGY DSAAGRGEYR RSYTSITTSS
VHPLHMSVSS SSPHTLHHTT SAGRLSSESK SSLRDQRLSP VSAASPAGSP EREQGIERRT
TDYLLSRSVD HLERPAPLPR PGALLCCTSE LIVNKGEETY RKARPTLVIP AHYMRLPGTH
PLSGQALLLQ SDVQSELETI QAELSACHQP QGQVLHKGEQ EGGTQGMGED QGGGADEWTL
QTAALPADLS IPNSLSQAGL DVVQMNGEDQ LLAEKTLMEL RGGKPLPHPR AWFVSLDGRS
NAHIRHSYID LQRAGCNSSC VGSNDASLDS GVDMSDVTPG RRVRDKVVVK TEPEAQPAAP
VVGHTPVLIV EDSNADEENS GSPTPVCSPE IPSPPPLPEP VVETSEDTGI DGEVFRTEET
PVHMNSSRPD KLLVPDDGGE DENKKSPWQK REERPLLAFN LK
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