ID E7F7W1_DANRE Unreviewed; 206 AA.
AC E7F7W1;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 2.
DT 10-MAY-2017, entry version 45.
DE SubName: Full=Zinc finger protein 1180 {ECO:0000313|Ensembl:ENSDARP00000097281};
GN Name=znf1180 {ECO:0000313|Ensembl:ENSDARP00000097281,
GN ECO:0000313|ZFIN:ZDB-GENE-050420-147};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000097281, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000097281}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000097281};
RG Ensembl;
RL Submitted (JUL-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000097281, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000097281,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000097281}.
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DR EMBL; AL929017; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR STRING; 7955.ENSDARP00000097281; -.
DR PaxDb; E7F7W1; -.
DR Ensembl; ENSDART00000106503; ENSDARP00000097281; ENSDARG00000071819.
DR ZFIN; ZDB-GENE-050420-147; znf1180.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00800000124383; -.
DR InParanoid; E7F7W1; -.
DR OMA; ANRIICE; -.
DR OrthoDB; EOG090B0D68; -.
DR TreeFam; TF328277; -.
DR Proteomes; UP000000437; Chromosome 22.
DR ExpressionAtlas; E7F7W1; baseline.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; -; 1.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR SMART; SM00355; ZnF_C2H2; 5.
DR SUPFAM; SSF57667; SSF57667; 3.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 5.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 5.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 64 91 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 92 119 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 120 147 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 148 175 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 176 203 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
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CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 176 198 ismart:ZnF_C2H2 [T]
FT MYHIT 64 91 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 92 114 ismart:ZnF_C2H2 [T]
FT MYHIT 120 142 ismart:ZnF_C2H2 [T]
FT MYHIT 176 203 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 150 170 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 178 198 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 120 147 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 148 175 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 148 170 ismart:ZnF_C2H2 [T]
FT MYHIT 92 119 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 64 86 ismart:ZnF_C2H2 [T]
FT MYHIT 122 142 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 94 114 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 66 86 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 206 AA; 23761 MW; B72801CDD404B588 CRC64;
MSDPEPCRIK PEETEELIDV MVKEESEELS EDEEKHHVKS EEETQSEAEQ SFLIQTVHTK
EKPYSCSECG KSFAQASNLR QHLKIHTGVR EHVCYECEKS FITAGGLKMH QRIHTGEKPF
TCTQCGRSFT QSSHLHQHML IHTGEKTHKC DQCSKIFLRA SELKMHLGFH GEEKPYSCSE
CGKRFTQPSH FKAHQKMHTG VREFVC
//
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