MyHits has reached its end of life and no longer provides data or services. Thank you for your support and trust for more than 23 years!
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
However, the webserver will remain online in its present form at least until end of March 2025.
To ensure the future of MyHits, we would be happy if a person or community would take over the resource or parts of it. Interested? Please contact us (myhits [at] sib.swiss).
Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Hau J, Martin O, Kuznetsov D, Falquet L.
MyHits: improvements to an interactive resource for analyzing protein sequences.
Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W433-7
- MyHits
| Description | SubName: Full=Zinc finger protein 995 {ECO:0000313|Ensembl:ENSDARP00000111030}; |
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| MyHits synonyms | E7F5F6_DANRE , E7F5F6 , 71C0580E570CF3AD |
 Legends: 1, C2H2-type. {ECO:0000259|PROSITE:PS50157}; 2, iprf:ZINC_FINGER_C2H2_2 [T]; 3, ismart:ZnF_C2H2 [T]; 4, ipat:ZINC_FINGER_C2H2_1 [T].
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ID E7F5F6_DANRE Unreviewed; 358 AA.
AC E7F5F6;
DT 08-MAR-2011, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 2.
DT 10-MAY-2017, entry version 53.
DE SubName: Full=Zinc finger protein 995 {ECO:0000313|Ensembl:ENSDARP00000111030};
GN Name=znf995 {ECO:0000313|Ensembl:ENSDARP00000111030,
GN ECO:0000313|ZFIN:ZDB-GENE-080215-13};
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Danio.
OX NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000111030, ECO:0000313|Proteomes:UP000000437};
RN [1] {ECO:0000313|Ensembl:ENSDARP00000111030}
RP IDENTIFICATION.
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000111030};
RG Ensembl;
RL Submitted (JUN-2011) to UniProtKB.
RN [2] {ECO:0000313|Ensembl:ENSDARP00000111030, ECO:0000313|Proteomes:UP000000437}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000111030,
RC ECO:0000313|Proteomes:UP000000437};
RX PubMed=23594743; DOI=10.1038/nature12111;
RA Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA Saunders D., Wallis J., Babbage A., Hammond S.,
RA Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA Stemple D.L.;
RT "The zebrafish reference genome sequence and its relationship to the
RT human genome.";
RL Nature 496:498-503(2013).
CC -!- CAUTION: The sequence shown here is derived from an Ensembl
CC automatic analysis pipeline and should be considered as
CC preliminary data. {ECO:0000313|Ensembl:ENSDARP00000111030}.
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DR EMBL; BX004879; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR RefSeq; XP_017211249.1; XM_017355760.1.
DR STRING; 7955.ENSDARP00000111030; -.
DR PaxDb; E7F5F6; -.
DR Ensembl; ENSDART00000125505; ENSDARP00000111030; ENSDARG00000103047.
DR GeneID; 108183935; -.
DR KEGG; dre:108183935; -.
DR ZFIN; ZDB-GENE-080215-13; znf995.
DR eggNOG; KOG1721; Eukaryota.
DR eggNOG; COG5048; LUCA.
DR GeneTree; ENSGT00870000136691; -.
DR InParanoid; E7F5F6; -.
DR OMA; DANNVEH; -.
DR OrthoDB; EOG091G02KC; -.
DR TreeFam; TF350925; -.
DR Proteomes; UP000000437; Chromosome 4.
DR Bgee; ENSDARG00000091176; -.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR InterPro; IPR013087; Znf_C2H2_type.
DR SMART; SM00355; ZnF_C2H2; 10.
DR SUPFAM; SSF57667; SSF57667; 6.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 10.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 10.
PE 4: Predicted;
KW Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT DOMAIN 77 104 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 105 132 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 133 160 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 161 188 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 189 216 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 217 244 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 245 272 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 273 297 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 301 328 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
FT DOMAIN 328 355 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
CC --------------------------------------------------------------------------
CC The following FT lines are automated annotations from the MyHits database.
CC --------------------------------------------------------------------------
FT MYHIT 77 104 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 133 155 ismart:ZnF_C2H2 [T]
FT MYHIT 330 350 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 273 295 ismart:ZnF_C2H2 [T]
FT MYHIT 105 127 ismart:ZnF_C2H2 [T]
FT MYHIT 275 295 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 189 211 ismart:ZnF_C2H2 [T]
FT MYHIT 301 328 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 247 267 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 77 99 ismart:ZnF_C2H2 [T]
FT MYHIT 135 155 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 189 216 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 217 239 ismart:ZnF_C2H2 [T]
FT MYHIT 79 99 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 328 350 ismart:ZnF_C2H2 [T]
FT MYHIT 161 188 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 219 239 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 245 272 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 303 323 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 105 132 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 301 323 ismart:ZnF_C2H2 [T]
FT MYHIT 163 183 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 217 244 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 245 267 ismart:ZnF_C2H2 [T]
FT MYHIT 273 297 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 328 355 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 161 183 ismart:ZnF_C2H2 [T]
FT MYHIT 133 160 iprf:ZINC_FINGER_C2H2_2 [T]
FT MYHIT 191 211 ipat:ZINC_FINGER_C2H2_1 [T]
FT MYHIT 107 127 ipat:ZINC_FINGER_C2H2_1 [T]
SQ SEQUENCE 358 AA; 41159 MW; 71C0580E570CF3AD CRC64;
MAFVKEESED VKIEETFTVK QEDLQEQTDL MLLKEKTHQQ NEMEEIQQDM TTDEKPTLTK
KTLSRGRHRK SKPSCNFSCK QCGKSFSQKP KLDVHIRDHT REKAYTCKQC GKSFYNTRNL
TVHMRIHTGE RPYTCQQCGK SFHKTGNLTV HMRIHTGERP YTCQQCGKSF QTTGNLTVHM
RIHTGEKPYS CPQCGKSYNQ NSNLEVHMRT HNGGRTFVCT QCGKSFAQKQ NLDLHMRIHT
GEKPYTCTEC GKSFPYKSTL KHHMIVHTGE KPFACAQCGK SFTCKANLRN HMNGHTGTIV
FTCDLCGKSL THKYSIKNHM KTHSGERFIC IECGKGFKHK RSLSNHMELH NGEQSPQN
//
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